RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TPH1P17752 444 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 CTNNA1P35221 906 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 CDKN1CP49918 316 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 XRCC4Q13426 336 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 GTF2H3Q13889 308 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 RPE65Q16518 533 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 FNBP1LQ5T0N5 605 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 DENND5AQ6IQ26 1287 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 DUS1LQ6P1R4 473 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 XKR5Q6UX68 686 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 CEACAM20Q6UY09 585 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 AMZ2Q86W34 360 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 PLXDC1Q8IUK5 500 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 LILRA3Q8N6C8 439 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 OR13C4Q8NGS5 318 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 BRSK1Q8TDC3 778 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 CXorf40BQ96DE9 158 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 INSM2Q96T92 566 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 VAT1Q99536 393 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 GBA3Q9H227 469 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 TRABDQ9H4I3 376 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 UCK1Q9HA47 277 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 SIDT1Q9NXL6 827 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 TRHDEQ9UKU6 1024 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 PACSIN2Q9UNF0 486 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 BOD1L1Q8NFC6 3051 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 GRID2IPA4D2P6 1211 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 GPR89AB7ZAQ6 455 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 DDX3YO15523 660 aaKnown RBP13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 SGTAO43765 313 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 RASSF9O75901 435 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 ITGB2P05107 769 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 POLBP06746 335 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 GPR89BP0CG08 455 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 HLA-DPA1P20036 260 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 GEMP55040 296 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 XIAPP98170 497 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 COLEC12Q5KU26 742 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 AGAP9Q5VTM2 703 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 CACHD1Q5VU97 1274 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 IRGCQ6NXR0 463 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 FBXO38Q6PIJ6 1188 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 WASH2PQ6VEQ5 465 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 PRICKLE2Q7Z3G6 844 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 PTRH1Q86Y79 214 aaKnown RBP13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 TMTC1Q8IUR5 882 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 NLGN4XQ8N0W4 816 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 NLGN4YQ8NFZ3 816 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 PPM1MQ96MI6 270 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 OR6C1Q96RD1 312 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 PANX2Q96RD6 677 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 WWP1Q9H0M0 922 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 ASB8Q9H765 288 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 AKIRIN1Q9H9L7 192 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 WASH6PQ9NQA3 447 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 HACD3Q9P035 362 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 PKP3Q9Y446 797 aa13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 TMEM184BQ9Y519 407 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-201ENST00000338427 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 IGHV5-51A0A0C4DH38 117 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 TCRBV7S2A1N4TA0A589 114 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 PJA2O43164 708 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 TIAF1O95411 115 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 DLGAP3O95886 979 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 MSH3P20585 1137 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 LPOP22079 712 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 FECHP22830 423 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 CTNNA2P26232 953 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 ARCN1P48444 511 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 RWDD2BP57060 319 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 RAB15P59190 212 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 KCNAB1Q14722 419 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 C16orf46Q6P387 395 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 LRRC57Q8N9N7 239 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 GALNT6Q8NCL4 622 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 DDHD1Q8NEL9 900 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 DESI2Q9BSY9 194 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 FSD1LQ9BXM9 530 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 GPN2Q9H9Y4 310 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 STARD5Q9NSY2 213 aa13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 PIH1D1Q9NWS0 290 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 R3HDM2Q9Y2K5 976 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-201ENST00000338427 ANXA9O76027 345 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 SRP72O76094 671 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 KIAA0754O94854 1291 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 PRAMEF1O95521 474 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 METTL18O95568 372 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 FOLR1P15328 257 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 MAP4P27816 1152 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 OAS2P29728 719 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 AKT1P31749 480 aa13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 TNNT3P45378 269 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-201ENST00000338427 COPS2P61201 443 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms