RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PIWIL4Q7Z3Z4 852 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ADGRG6Q86SQ4 1221 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 HEATR4Q86WZ0 1026 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 UBALD2Q8IYN6 164 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TP53I13Q8NBR0 393 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ZNF473Q8WTR7 871 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 EXT2Q93063 718 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KIAA1191Q96A73 305 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 HIC2Q96JB3 615 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NELL2Q99435 816 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TSSK1BQ9BXA7 367 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NSRP1Q9H0G5 558 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 OR2AG1Q9H205 316 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ZNF395Q9H8N7 513 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ITM2CQ9NQX7 267 aa14.53□□□□□ -0.08
CDK5RAP3-201ENST00000338399 BTN3A1O00481 513 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 EDF1O60869 148 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ATG13O75143 517 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 CDK14O94921 469 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 DGKAP23743 735 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 AOAHP28039 575 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RGS4P49798 205 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 INPP5AQ14642 412 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TSNQ15631 228 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TTLL9Q3SXZ7 439 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ANO7Q6IWH7 933 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 NEK5Q6P3R8 708 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ADAMTSL4Q6UY14 1074 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 RHEBL1Q8TAI7 183 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 STAG3L4Q8TBR4 150 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 SREK1Q8WXA9 508 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 PDLIM5Q96HC4 596 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 BTBD1Q9H0C5 482 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 KDM4CQ9H3R0 1056 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TBC1D17Q9HA65 648 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 TRIM39Q9HCM9 518 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 ATXN10Q9UBB4 475 aa14.52□□□□□ -0.08
CDK5RAP3-201ENST00000338399 QSOX1O00391 747 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 RAD51BO15315 384 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FTH1P02794 183 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SERPINE1P05121 402 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ATP5F1P24539 256 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CDK3Q00526 305 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 BOP1Q14137 746 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MAP7D1Q3KQU3 841 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 LIPMQ5VYY2 423 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TSTD1Q8NFU3 115 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ELMO1Q92556 727 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MOCOSQ96EN8 888 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 COX14Q96I36 57 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 HHIPQ96QV1 700 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ATOH8Q96SQ7 321 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ELAC2Q9BQ52 826 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ZCCHC2Q9C0B9 1178 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 C20orf27Q9GZN8 174 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CYP4F12Q9HCS2 524 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FZD3Q9NPG1 666 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ACSS2Q9NR19 701 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 USP36Q9P275 1121 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 KLHL42Q9P2K6 505 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MUTYHQ9UIF7 546 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 RNF112Q9ULX5 631 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 TMEM98Q9Y2Y6 226 aa14.52□□□□□ -0.09
CDK5RAP3-201ENST00000338399 A8MT66 165 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 F8W8V4 182 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 UBXN8O00124 270 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SLC31A1O15431 190 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ITM2AO43736 263 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 KERAO60938 352 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GRK2P25098 689 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PRLHRP49683 370 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 HSPA14Q0VDF9 509 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CGB2Q6NT52 195 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MYO1HQ8N1T3 1032 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 OR6Y1Q8NGX8 325 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FUBP1Q96AE4 644 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PHF21BQ96EK2 531 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MYOCQ99972 504 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GATA5Q9BWX5 397 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 LGR4Q9BXB1 951 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FAM8A1Q9UBU6 413 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 OR1A2Q9Y585 309 aa14.51□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SMIM24O75264 130 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SNNO75324 88 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 LYPLA1O75608 230 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CBSLP0DN79 551 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ZNF8P17098 575 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CBSP35520 551 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SLC1A6P48664 564 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 NAGLUP54802 743 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 OVGP1Q12889 678 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GTF2H3Q13889 308 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 DOK6Q6PKX4 331 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CYHR1Q6ZMK1 362 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 OR2T34Q8NGX1 318 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 THOC1Q96FV9 657 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CCM2Q9BSQ5 444 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 C1QTNF7Q9BXJ2 289 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 EPHX3Q9H6B9 360 aa14.5□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SGK2Q9HBY8 427 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms