RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 MCOLN3Q8TDD5 553 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 HASPINQ8TF76 798 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 C12orf42Q96LP6 360 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 ELOVL6Q9H5J4 265 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 TNFRSF12AQ9NP84 129 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 HPS4Q9NQG7 708 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 BTRCQ9Y297 605 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 HCN4Q9Y3Q4 1203 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 THSD7AQ9UPZ6 1657 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 MCM3APO60318 1980 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 CCDC182A6NF36 153 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 SLC1A2P43004 574 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 CLCNKBP51801 687 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 EIF2B5Q13144 721 aaKnown RBP11.74□□□□□ -0.53
LIMK2-202ENST00000333611 GRIK4Q16099 956 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 SLC36A3Q495N2 470 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 ZNF789Q5FWF6 425 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 AGAP6Q5VW22 663 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 METTL4Q8N3J2 472 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 FBXO30Q8TB52 745 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 ZNF641Q96N77 438 aaPredicted RBP11.74□□□□□ -0.53
LIMK2-202ENST00000333611 AGAP4Q96P64 663 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 AIFM2Q9BRQ8 373 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 SEZ6LQ9BYH1 1024 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 CLPBQ9H078 707 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 TAS2R9Q9NYW1 312 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 GJD2Q9UKL4 321 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 H0YJX3 145 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 SBK3P0C264 359 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 CCNYL3P0C7X3 344 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 POLR2CP19387 275 aaPredicted RBP11.74□□□□□ -0.53
LIMK2-202ENST00000333611 DDCP20711 480 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 TAF6P49848 677 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 PPP5CP53041 499 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 KCNC4Q03721 635 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 TP53BP2Q13625 1128 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 CUZD1Q86UP6 607 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 TIGD4Q8IY51 512 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 DCBLD1Q8N8Z6 715 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 KDM1BQ8NB78 822 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 PPHLN1Q8NEY8 458 aaKnown RBP11.74□□□□□ -0.53
LIMK2-202ENST00000333611 PHF21AQ96BD5 680 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 EGLN2Q96KS0 407 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 SAV1Q9H4B6 383 aaPredicted RBP11.74□□□□□ -0.53
LIMK2-202ENST00000333611 CPNE5Q9HCH3 593 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 EIF2B3Q9NR50 452 aaKnown RBP11.74□□□□□ -0.53
LIMK2-202ENST00000333611 ARMC1Q9NVT9 282 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 VTI1BQ9UEU0 232 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 USP3Q9Y6I4 520 aa11.74□□□□□ -0.53
LIMK2-202ENST00000333611 ZNF99A8MXY4 864 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 AXIN1O15169 862 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 AKR7A2O43488 359 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 H2AFYO75367 372 aaKnown RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 UPK1BO75841 260 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 NPR3P17342 541 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 CYP2B6P20813 491 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 GALNT2Q10471 571 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 ZNF517Q6ZMY9 492 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 ATPAF2Q8N5M1 289 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 GALNT11Q8NCW6 608 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 NCLNQ969V3 563 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 UQCC2Q9BRT2 126 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 MCMBPQ9BTE3 642 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 DCSTAMPQ9H295 470 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 VRTNQ9H8Y1 702 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 AKIP1Q9NQ31 210 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 POLR3BQ9NW08 1133 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 CNOT11Q9UKZ1 510 aaKnown RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 INVSQ9Y283 1065 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 MAN2B2Q9Y2E5 1009 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 NCF1BA6NI72 391 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 NCF1CA8MVU1 366 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 NFKBIEO00221 500 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 PLK4O00444 970 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 NCF1P14598 390 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 EDNRBP24530 442 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 SOX4Q06945 474 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 TOP3AQ13472 1001 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 MAPRE2Q15555 327 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 BCL7AQ4VC05 210 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 TPRG1LQ5T0D9 272 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 ANKRD34AQ69YU3 496 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 GPRIN1Q7Z2K8 1008 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 RAB43Q86YS6 212 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 APOBEC3FQ8IUX4 373 aaKnown RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 CAMKK1Q8N5S9 505 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 OR10Q1Q8NGQ4 319 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 RASSF5Q8WWW0 418 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 NEDD4LQ96PU5 975 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 GPR22Q99680 433 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 CDADC1Q9BWV3 514 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 RIBC2Q9H4K1 309 aa11.73□□□□□ -0.53
LIMK2-202ENST00000333611 PAK1IP1Q9NWT1 392 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 RGS17Q9UGC6 210 aaPredicted RBP11.73□□□□□ -0.53
LIMK2-202ENST00000333611 ANAPC2Q9UJX6 822 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms