RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 B4GALNT1Q00973 533 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 NFE2L1Q14494 772 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 DNAJC21Q5F1R6 531 aaKnown RBP16.09■□□□□ 0.17
C11orf88-201ENST00000332814 RNASEH2BQ5TBB1 312 aaKnown RBP16.09■□□□□ 0.17
C11orf88-201ENST00000332814 AGAP9Q5VTM2 703 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 WASH2PQ6VEQ5 465 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 ZNF438Q7Z4V0 828 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 CAND1Q86VP6 1230 aaKnown RBP16.09■□□□□ 0.17
C11orf88-201ENST00000332814 HOOK3Q86VS8 718 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 MARCH9Q86YJ5 346 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 NAT8LQ8N9F0 302 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 OR2L2Q8NH16 312 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 OR10G6Q8NH81 332 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 HM13Q8TCT9 377 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 NAT14Q8WUY8 206 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 GRAMD1AQ96CP6 724 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 NXPE2Q96DL1 559 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 TRIM51Q9BSJ1 452 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 TSSK1BQ9BXA7 367 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 WASH6PQ9NQA3 447 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 TREX1Q9NSU2 369 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 CPNE7Q9UBL6 633 aa16.09■□□□□ 0.17
C11orf88-201ENST00000332814 D6RAR5 112 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 TMX2-CTNND1H3BSU7 103 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 KIF2AO00139 706 aaPredicted RBP16.08■□□□□ 0.16
C11orf88-201ENST00000332814 SMAPO00193 183 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 CD3EAPO15446 510 aaKnown RBP16.08■□□□□ 0.16
C11orf88-201ENST00000332814 DUX1O43812 170 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 VAPBO95292 243 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 TUBB4AP04350 444 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 GSTM1P09488 218 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 MAPK9P45984 424 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 TTPAP49638 278 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 OR1D5P58170 312 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 GSTM4Q03013 218 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 C2orf54Q08AI8 447 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 ISXQ2M1V0 245 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 MRNIPQ6NTE8 343 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 CES3Q6UWW8 571 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 ABRAXAS1Q6UWZ7 409 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 PACS1Q6VY07 963 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 SDCCAG8Q86SQ7 713 aaPredicted RBP16.08■□□□□ 0.16
C11orf88-201ENST00000332814 CLDN19Q8N6F1 224 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 SPATA4Q8NEY3 305 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 ZNF669Q96BR6 464 aaPredicted RBP16.08■□□□□ 0.16
C11orf88-201ENST00000332814 MFSD3Q96ES6 412 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 SNF8Q96H20 258 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 SGSM3Q96HU1 749 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 LINC00615Q96LM1 132 aaPredicted RBP16.08■□□□□ 0.16
C11orf88-201ENST00000332814 TMEM74Q96NL1 305 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 CCM2Q9BSQ5 444 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 TRIM31Q9BZY9 425 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 STRADBQ9C0K7 418 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 POT1Q9NUX5 634 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 ACSL5Q9ULC5 683 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 PSMD13Q9UNM6 376 aa16.08■□□□□ 0.16
C11orf88-201ENST00000332814 DNAH14Q0VDD8 3507 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 FAM237BA0A1B0GVD1 139 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 A0A1W2PQM1 296 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 EFCAB8A8MWE9 144 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 NTN3O00634 580 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 NDUFS3O75489 264 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 URI1O94763 535 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 CPNE6O95741 557 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 POLBP06746 335 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 XRCC1P18887 633 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 INHBCP55103 352 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 GPLD1P80108 840 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 NR1D2Q14995 579 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 MORF4L2Q15014 288 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 CLPPQ16740 277 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 SYTL3Q4VX76 610 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 KIAA0930Q6ICG6 404 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 MICALCLQ6ZW33 695 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 PIM3Q86V86 326 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 ZNF761Q86XN6 746 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 RBM12BQ8IXT5 1001 aaKnown RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 CFAP206Q8IYR0 622 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 MPP5Q8N3R9 675 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 BBOF1Q8ND07 529 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 GATA6Q92908 595 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 CCDC97Q96F63 343 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 STAMBPL1Q96FJ0 436 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 EPB41L5Q9HCM4 733 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 IMP3Q9NV31 184 aaKnown RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 SCHIP1Q9P0W5 487 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 ATXN7L1Q9ULK2 861 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-201ENST00000332814 AK5Q9Y6K8 562 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 RPS6KL1Q9Y6S9 549 aa16.07■□□□□ 0.16
C11orf88-201ENST00000332814 ARID1BQ8NFD5 2236 aaPredicted RBP16.06■□□□□ 0.16
C11orf88-201ENST00000332814 C17orf113A0A1B0GUU1 675 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 TMEM8BA6NDV4 472 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 TRABD2BA6NFA1 517 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 FAM187AA6NFU0 413 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 OR52A4PA6NMU1 304 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 C1QTNF9BB2RNN3 333 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 C1QTNF9P0C862 333 aa16.06■□□□□ 0.16
C11orf88-201ENST00000332814 EPHA4P54764 986 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms