RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 PLIN3O60664 434 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 LYPLA1O75608 230 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 TIPRLO75663 272 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 OR2B3O76000 313 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 INHBAP08476 426 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 GARSP41250 739 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RECQLP46063 649 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 MEOX2P50222 304 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CPT1AP50416 773 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ALDH6A1Q02252 535 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SEMA3BQ13214 749 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 STARD3Q14849 445 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ACOX1Q15067 660 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 BTBD16Q32M84 506 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ADPRMQ3LIE5 342 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 FUT11Q495W5 492 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PTPN20Q4JDL3 420 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 FAM102BQ5T8I3 360 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ANKRD22Q5VYY1 191 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 FAM160B1Q5W0V3 765 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PNCKQ6P2M8 343 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 DARS2Q6PI48 645 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RNF165Q6ZSG1 346 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CEP68Q76N32 757 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CATSPER4Q7RTX7 472 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RNF180Q86T96 592 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 DHRSXQ8N5I4 330 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 FAM156AQ8NDB6 213 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 OR4D10Q8NGI6 311 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 OR10T2Q8NGX3 314 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 TSPEARQ8WU66 669 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 IPCEF1Q8WWN9 437 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CPA5Q8WXQ8 436 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 MUL1Q969V5 352 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SGTBQ96EQ0 304 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SORT1Q99523 831 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 MMP19Q99542 508 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CPNE1Q99829 537 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 FAM118BQ9BPY3 351 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 C11orf70Q9BRQ4 267 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ALOXE3Q9BYJ1 711 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PCIF1Q9H4Z3 704 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CATSPERBQ9H7T0 1116 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CISHQ9NSE2 258 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF214Q9UL59 606 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 EMCNQ9ULC0 261 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PCDHGA2Q9Y5H1 932 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 COPG1Q9Y678 874 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CDY2AQ9Y6F7 541 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 CDY1Q9Y6F8 540 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 TRIP11Q15643 1979 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 GBF1Q92538 1859 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF106Q9H2Y7 1883 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RGSL1A5PLK6 1076 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 OR6C70A6NIJ9 312 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 AGAP5A6NIR3 686 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 TISP43B9A030 160 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 STX16-NPEPL1H3BU86 382 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ACKR2O00590 384 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 NFIBO00712 420 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PAPSS1O43252 624 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 AKR7A2O43488 359 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PSIP1O75475 530 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SLC22A5O76082 557 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 FABP1P07148 127 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ALOX12P18054 663 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 GPD1P21695 349 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 GBX2P52951 348 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RGS1Q08116 209 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF425Q6IV72 752 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SLC26A9Q7LBE3 791 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PRSS48Q7RTY5 328 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RAB43Q86YS6 212 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 EPHX4Q8IUS5 362 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PQLC3Q8N755 202 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PLD5Q8N7P1 536 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RP9Q8TA86 221 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 ATOH1Q92858 354 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 NTAN1Q96AB6 310 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PBXIP1Q96AQ6 731 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SIPA1Q96FS4 1042 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 KLHL15Q96M94 604 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 GTPBP2Q9BX10 602 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 HDHD5Q9BXW7 423 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 SLIRPQ9GZT3 109 aaKnown RBP6.58□□□□□ -1.36
ZNF540-201ENST00000316433 LRRC4Q9HBW1 653 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 EHD3Q9NZN3 535 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 USP21Q9UK80 565 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 RAB23Q9ULC3 237 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 JAG2Q9Y219 1238 aa6.58□□□□□ -1.36
ZNF540-201ENST00000316433 PTPRDP23468 1912 aa6.57□□□□□ -1.36
ZNF540-201ENST00000316433 COL4A6Q14031 1691 aa6.57□□□□□ -1.36
ZNF540-201ENST00000316433 RNF103-CHMP3A0A140T963 221 aa6.57□□□□□ -1.36
ZNF540-201ENST00000316433 TCRBV3S1A0A5B6 114 aa6.57□□□□□ -1.36
ZNF540-201ENST00000316433 E5RI56 91 aa6.57□□□□□ -1.36
ZNF540-201ENST00000316433 NPHS1O60500 1241 aa6.57□□□□□ -1.36
ZNF540-201ENST00000316433 AVILO75366 819 aa6.57□□□□□ -1.36
ZNF540-201ENST00000316433 VAPBO95292 243 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms