RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 OR4F6Q8NGB9 312 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 BOCQ9BWV1 1114 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 LTB4R2Q9NPC1 389 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 NMRK2Q9NPI5 230 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 FCF1Q9Y324 198 aaKnown RBP25.01■■□□□ 1.59
HOXB3-201ENST00000311626 A0A087WXM4 84 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 CD160O95971 181 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 MZF1P28698 734 aaPredicted RBP25.01■■□□□ 1.59
HOXB3-201ENST00000311626 RPS9P46781 194 aaKnown RBP25.01■■□□□ 1.59
HOXB3-201ENST00000311626 FOXM1Q08050 763 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 ABRAXAS2Q15018 415 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 RFTN2Q52LD8 501 aaPredicted RBP25.01■■□□□ 1.59
HOXB3-201ENST00000311626 TMTC4Q5T4D3 741 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 ERI1Q8IV48 349 aaKnown RBP25.01■■□□□ 1.59
HOXB3-201ENST00000311626 PACRGLQ8N7B6 248 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 NUSAP1Q9BXS6 441 aaKnown RBP25.01■■□□□ 1.59
HOXB3-201ENST00000311626 NAA50Q9GZZ1 169 aaKnown RBP25.01■■□□□ 1.59
HOXB3-201ENST00000311626 ACTL8Q9H568 366 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 GBF1Q92538 1859 aa25.01■■□□□ 1.59
HOXB3-201ENST00000311626 LDLRP01130 860 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 TTPAP49638 278 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 SEMG2Q02383 582 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 SGO1Q5FBB7 561 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 IRAK1BP1Q5VVH5 260 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 FRA10AC1Q70Z53 315 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 ISOC1Q96CN7 298 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 SPATA17Q96L03 361 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 RNF38Q9H0F5 515 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 FAM234BA2RU67 622 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 HSPA7P48741 367 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 TUBA4AP68366 448 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 FAM151BQ6UXP7 276 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 GOLGA7Q7Z5G4 137 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 TTC30BQ8N4P2 665 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 CLDN19Q8N6F1 224 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 FAM81AQ8TBF8 368 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 C12orf43Q96C57 262 aaKnown RBP25■■□□□ 1.59
HOXB3-201ENST00000311626 XRN2Q9H0D6 950 aaKnown RBP eCLIP25■■□□□ 1.59
HOXB3-201ENST00000311626 NSUN3Q9H649 340 aaKnown RBP25■■□□□ 1.59
HOXB3-201ENST00000311626 SMPD3Q9NY59 655 aaPredicted RBP25■■□□□ 1.59
HOXB3-201ENST00000311626 TMCO1Q9UM00 188 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 FRMPD3Q5JV73 1810 aa25■■□□□ 1.59
HOXB3-201ENST00000311626 OR7A17O14581 309 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 MAGEB3O15480 346 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 IST1P53990 364 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 EMP3P54852 163 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 PPP1R8Q12972 351 aaKnown RBP24.99■■□□□ 1.59
HOXB3-201ENST00000311626 PDCD4Q53EL6 469 aaKnown RBP24.99■■□□□ 1.59
HOXB3-201ENST00000311626 COQ5Q5HYK3 327 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 TXNDC11Q6PKC3 985 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 DLEU7Q6UYE1 221 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 DNAJC14Q6Y2X3 702 aaPredicted RBP24.99■■□□□ 1.59
HOXB3-201ENST00000311626 LYSMD3Q7Z3D4 306 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 ZFAND4Q86XD8 727 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 PTRH1Q86Y79 214 aaKnown RBP24.99■■□□□ 1.59
HOXB3-201ENST00000311626 DTWD1Q8N5C7 304 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 FAM86B1Q8N7N1 296 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 DBF4BQ8NFT6 615 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 LKAAEAR1Q8TD35 194 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 SEPT8Q92599 483 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 CASD1Q96PB1 797 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 NPLQ9BXD5 320 aaPredicted RBP24.99■■□□□ 1.59
HOXB3-201ENST00000311626 TM6SF2Q9BZW4 377 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 FARSBQ9NSD9 589 aaKnown RBP24.99■■□□□ 1.59
HOXB3-201ENST00000311626 RIC8BQ9NVN3 520 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 K7ERQ8 282 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 STC2O76061 302 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 GKP32189 559 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 CLCN7P51798 805 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 EMX2Q04743 252 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 NEDD8Q15843 81 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 KCTD21Q4G0X4 260 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 GPR107Q5VW38 600 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 CYP20A1Q6UW02 462 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 PCSK9Q8NBP7 692 aaKnown RBP24.99■■□□□ 1.59
HOXB3-201ENST00000311626 APOL5Q9BWW9 433 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 C1QTNF3Q9BXJ4 246 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 NFKBIAP25963 317 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 ELK4P28324 431 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 PRKG2Q13237 762 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 AP5B1Q2VPB7 878 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 ANKRD34AQ69YU3 496 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 RNF186Q9NXI6 227 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 GALNT8Q9NY28 637 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 PCDHB7Q9Y5E2 793 aa24.99■■□□□ 1.59
HOXB3-201ENST00000311626 CHD5Q8TDI0 1954 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 C2orf78A6NCI8 922 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 MOXD2PA6NHM9 499 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 TCF3P15923 654 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 CAPGP40121 348 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 EEFSECP57772 596 aaKnown RBP24.98■■□□□ 1.59
HOXB3-201ENST00000311626 ESRRGP62508 458 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 PTGR1Q14914 329 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 C5orf22Q49AR2 442 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 CARNMT1Q8N4J0 409 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 SEZ6LQ9BYH1 1024 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 GPR63Q9BZJ6 419 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 POLR1BQ9H9Y6 1135 aa24.98■■□□□ 1.59
HOXB3-201ENST00000311626 CARS2Q9HA77 564 aaKnown RBP24.98■■□□□ 1.59
HOXB3-201ENST00000311626 UTS2RQ9UKP6 389 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms