RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MAPTP10636 758 aaKnown RBP12.52□□□□□ -0.4
USP38-201ENST00000307017 KLHDC10Q6PID8 442 aa12.52□□□□□ -0.4
USP38-201ENST00000307017 CLNKQ7Z7G1 428 aa12.52□□□□□ -0.4
USP38-201ENST00000307017 STOX2Q9P2F5 926 aaPredicted RBP12.52□□□□□ -0.4
USP38-201ENST00000307017 ZFP37Q9Y6Q3 630 aaPredicted RBP12.52□□□□□ -0.4
USP38-201ENST00000307017 NRCAMQ92823 1304 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 TRAV6A0A075B6T7 132 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 FSHRP23945 695 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 NR4A2P43354 598 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 PLA2G16P53816 162 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 RPS3AP61247 264 aaKnown RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 SLC3A1Q07837 685 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 MEA1Q16626 185 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 BEND5Q7L4P6 421 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 SNX29P2Q8IUI4 249 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 NRSN1Q8IZ57 195 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 DEPDC4Q8N2C3 294 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 AP3S1Q92572 193 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 PPP3R2Q96LZ3 170 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 CACNA1FO60840 1977 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 ATP6V1G1O75348 118 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 MTX2O75431 263 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 APOL3O95236 402 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 PGGT1BP53609 377 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 GTF2H2Q13888 395 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 CAPSQ13938 189 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 ZNF234Q14588 700 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 INTS11Q5TA45 600 aaKnown RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 GTF2H2CQ6P1K8 395 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 CD302Q8IX05 232 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 IL4I1Q96RQ9 567 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 CPXM1Q96SM3 734 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 ZCCHC2Q9C0B9 1178 aaKnown RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 TTYH1Q9H313 450 aaPredicted RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 C13orf42A0A1B0GVH6 325 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 CATP04040 527 aaKnown RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 ZNF16P17020 682 aaPredicted RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 VGLL4Q14135 290 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 PUM1Q14671 1186 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP38-201ENST00000307017 ATXN7L3Q14CW9 347 aaPredicted RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 PYCR2Q96C36 320 aa12.52□□□□□ -0.41
USP38-201ENST00000307017 MTERF1Q99551 399 aaKnown RBP12.52□□□□□ -0.41
USP38-201ENST00000307017 TCRBV7S3A2A0A539 114 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 FABP12A6NFH5 140 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TTC34A8MYJ7 566 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 BHMG1C9JSJ3 638 aaPredicted RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 TNFRSF10BO14763 440 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 GLUD1P00367 558 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 THRBP10828 461 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 UGT1A5P35504 534 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TTPAP49638 278 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 BNIP3Q12983 259 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 ARL13AQ5H913 290 aaPredicted RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 PHC2Q8IXK0 858 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 HMCESQ96FZ2 354 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 C8orf48Q96LL4 319 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 LRTM1Q9HBL6 345 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TREM1Q9NP99 234 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 VNN3Q9NY84 501 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 ST14Q9Y5Y6 855 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 FRMPD4Q14CM0 1322 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 EDF1O60869 148 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 UGT2B4P06133 528 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 RPL17P18621 184 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 IST1P53990 364 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 WNT3AP56704 352 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 BLMHQ13867 455 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 C1orf94Q6P1W5 598 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 ZNF248Q8NDW4 579 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 ZNF285Q96NJ3 590 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 WDR12Q9GZL7 423 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 RNF38Q9H0F5 515 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 SLC6A15Q9H2J7 730 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 BCAS3Q9H6U6 928 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 MRPL15Q9P015 296 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TRIM64BA6NI03 449 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 WRBO00258 174 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 CTSOP43234 321 aaPredicted RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 OR2B6P58173 313 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 DCDC1P59894 354 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TSPAN5P62079 268 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TREML2Q5T2D2 321 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TTC29Q8NA56 475 aaPredicted RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 ZNF607Q96SK3 696 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 GPN3Q9UHW5 284 aaPredicted RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 VWA7Q9Y334 891 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 PLLPQ9Y342 182 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TRPV2Q9Y5S1 764 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 MAU2Q9Y6X3 613 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 PER2O15055 1255 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 CLCN5P51795 746 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 KCNC4Q03721 635 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TRABD2AQ86V40 505 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 ZNF398Q8TD17 642 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms