RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 NPIPA1Q9UND3 350 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 AZGP1P25311 298 aaKnown RBP12.32□□□□□ -0.44
SLX4-201ENST00000294008 CTHP32929 405 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 TMEM35AQ53FP2 167 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 FBXO48Q5FWF7 155 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 PDSS1Q5T2R2 415 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 CARD17Q5XLA6 110 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 MR1Q95460 341 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 P2RX7Q99572 595 aaKnown RBP12.32□□□□□ -0.44
SLX4-201ENST00000294008 ACSS2Q9NR19 701 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 DGKBQ9Y6T7 804 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 TMEM2Q9UHN6 1383 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 E7ENQ6 273 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 HNRNPLP14866 589 aaKnown RBP eCLIP12.32□□□□□ -0.44
SLX4-201ENST00000294008 ARCN1P48444 511 aaKnown RBP12.32□□□□□ -0.44
SLX4-201ENST00000294008 TMEM126BQ8IUX1 230 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 COPS5Q92905 334 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 NSMCE3Q96MG7 304 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 ACTR10Q9NZ32 417 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 NDUFA13Q9P0J0 144 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 GMIPQ9P107 970 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 ADGRE2Q9UHX3 823 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 LEF1Q9UJU2 399 aaPredicted RBP12.32□□□□□ -0.44
SLX4-201ENST00000294008 IPO13O94829 963 aaKnown RBP12.32□□□□□ -0.44
SLX4-201ENST00000294008 UROSP10746 265 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 IL7RP16871 459 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 NR2C2P49116 596 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 SEMG2Q02383 582 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 SRYQ05066 204 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 LIPEQ05469 1076 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 KANSL1Q7Z3B3 1105 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 ARPINQ7Z6K5 226 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 RANBP3LQ86VV4 465 aaPredicted RBP12.32□□□□□ -0.44
SLX4-201ENST00000294008 KCTD4Q8WVF5 259 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 APOLD1Q96LR9 279 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 SSX3Q99909 188 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 PCDHGC5Q9Y5F6 944 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 MEN1O00255 615 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 TNFSF12O43508 249 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 LRIG2O94898 1065 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 SMIM10L2AP0DMW4 78 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 SMIM10L2BP0DMW5 78 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 HCAR3P49019 387 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 BICRALQ6AI39 1079 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 MTFR2Q6P444 385 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 ZNF720Q7Z2F6 126 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 ZER1Q7Z7L7 766 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 FAM35AQ86V20 835 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 NDC1Q9BTX1 674 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 OR10A4Q9H209 315 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 DCLRE1BQ9H816 532 aa12.32□□□□□ -0.44
SLX4-201ENST00000294008 PLD2O14939 933 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 PLATP00750 562 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 ASGR1P07306 291 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 PVALBP20472 110 aaPredicted RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 NPR2P20594 1047 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 CPN2P22792 545 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 PTPN4P29074 926 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 GRIA4P48058 902 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 AMIGO2Q86SJ2 522 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 PIK3C3Q8NEB9 887 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 DCBLD2Q96PD2 775 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 ZNF184Q99676 751 aaPredicted RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 PDP1Q9P0J1 537 aaPredicted RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 ABCD2Q9UBJ2 740 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 DNPEPQ9ULA0 475 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 A0A087WXM4 84 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 TNFRSF10BO14763 440 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 TLR5O60602 858 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 ACTL6BO94805 426 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 UBOX5O94941 541 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 SNRPB2P08579 225 aaKnown RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 LPOP22079 712 aaPredicted RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 SDC2P34741 201 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 CASP5P51878 434 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 CNTN2Q02246 1040 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 CTBP1Q13363 440 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 PCID2Q5JVF3 399 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 TTLL10Q6ZVT0 673 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 VTCN1Q7Z7D3 282 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 TC2NQ8N9U0 490 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 NCSTNQ92542 709 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 TRPV4Q9HBA0 871 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 USP29Q9HBJ7 922 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 TRPS1Q9UHF7 1281 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 ZNF225Q9UK10 706 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 NAALADL1Q9UQQ1 740 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 ADAM18Q9Y3Q7 739 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 SCTRP47872 440 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 AFF1P51825 1210 aaKnown RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 TLE2Q04725 743 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 SLC5A5Q92911 643 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 LRMDAQ9H2I8 198 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 ITSN2Q9NZM3 1697 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 B8ZZF3 427 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 IL1AP01583 271 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 APLP1P51693 650 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 CDH4P55283 916 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms