RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GOLGA4Q13439 2230 aaKnown RBP17.7■□□□□ 0.42
CAPN1-201ENST00000279247 FFAR2O15552 330 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 S100BP04271 92 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 NNMTP40261 264 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 VHLP40337 213 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 SATB1Q01826 763 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 PTK2BQ14289 1009 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 NAIF1Q69YI7 327 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 SBSNQ6UWP8 590 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 BEND7Q8N7W2 519 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 SP7Q8TDD2 431 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 DLG3Q92796 817 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 N4BP2L2Q92802 583 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 RSPRY1Q96DX4 576 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 COPS8Q99627 209 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 DUS2Q9NX74 493 aaKnown RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 FBP2O00757 339 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 C1SP09871 688 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 PSMA3P25788 255 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 ETV3P41162 512 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 RGS4P49798 205 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 METAP1P53582 386 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 MRPS22P82650 360 aaKnown RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 FLOT2Q14254 428 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 DHCR24Q15392 516 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 PLA2G4EQ3MJ16 856 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 REP15Q6BDI9 236 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 GPRIN3Q6ZVF9 776 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 ZBTB2Q8N680 514 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 LRCH3Q96II8 777 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 ANGPTL3Q9Y5C1 460 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 OR2AG2A6NM03 316 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 PLK4O00444 970 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 KPNA3O00505 521 aaPredicted RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 E2F3O00716 465 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 HTR6P50406 440 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 INHBCP55103 352 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 KANK2Q63ZY3 851 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 LPCAT4Q643R3 524 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 LETMD1Q6P1Q0 360 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 SERPINA13PQ6UXR4 307 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 SFTPA1Q8IWL2 248 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 PPFIBP2Q8ND30 876 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 NUDT8Q8WV74 236 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 NAF1Q96HR8 494 aaKnown RBP17.69■□□□□ 0.42
CAPN1-201ENST00000279247 HTATIP2Q9BUP3 242 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 PCDHAC1Q9H158 963 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 WWOXQ9NZC7 414 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
CAPN1-201ENST00000279247 E7ENX8 843 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 MRASO14807 208 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 SNRPB2P08579 225 aaKnown RBP17.68■□□□□ 0.42
CAPN1-201ENST00000279247 NRIP1P48552 1158 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 CSNK1DP48730 415 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 EPHA5P54756 1037 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 PLIN5Q00G26 463 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 MS4A2Q01362 244 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 GPM6BQ13491 265 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 CHSY3Q70JA7 882 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 OR56A4Q8NGH8 313 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 METTL6Q8TCB7 284 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 GDPD5Q8WTR4 605 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 ZNF707Q96C28 371 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-201ENST00000279247 S100A14Q9HCY8 104 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 TBC1D14Q9P2M4 693 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 ANGPTL2Q9UKU9 493 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 SNUPNO95149 360 aaKnown RBP17.68■□□□□ 0.42
CAPN1-201ENST00000279247 CAPN1P07384 714 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 ERVPABLB-1P60509 514 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 PSME3P61289 254 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 SLC44A4Q53GD3 710 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 HSD11B1LQ7Z5J1 315 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 METTL3Q86U44 580 aaKnown RBP17.68■□□□□ 0.42
CAPN1-201ENST00000279247 KBTBD2Q8IY47 623 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 SERPINI1Q99574 410 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 WRAP53Q9BUR4 548 aaKnown RBP17.68■□□□□ 0.42
CAPN1-201ENST00000279247 PRM3Q9NNZ6 103 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 MCM8Q9UJA3 840 aa17.68■□□□□ 0.42
CAPN1-201ENST00000279247 CTSLP07711 333 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 SLC6A11P48066 632 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 DGKGP49619 791 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 B4GALNT1Q00973 533 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 PRSS36Q5K4E3 855 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 IL27RAQ6UWB1 636 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 ADAMTSL2Q86TH1 951 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 FAM126AQ9BYI3 521 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-201ENST00000279247 ELOVL2Q9NXB9 296 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 CACNA2D2Q9NY47 1150 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 RAD51BO15315 384 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 CHEK2O96017 543 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 CYP17A1P05093 508 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 CAPRIN1Q14444 709 aaKnown RBP17.67■□□□□ 0.42
CAPN1-201ENST00000279247 RNF111Q6ZNA4 994 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 GOLGA7Q7Z5G4 137 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 FUNDC1Q8IVP5 155 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 PGAM4Q8N0Y7 254 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 BHLHE22Q8NFJ8 381 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-201ENST00000279247 VPS33AQ96AX1 596 aa17.67■□□□□ 0.42
CAPN1-201ENST00000279247 ECHDC3Q96DC8 303 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms