RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ATP13A3Q9H7F0 1226 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 BRD9Q9H8M2 597 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 NSMCE4AQ9NXX6 385 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 DNMT3BQ9UBC3 853 aaKnown RBP8.98□□□□□ -0.97
CKAP2-201ENST00000258607 SLC22A14Q9Y267 594 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 MAGED1Q9Y5V3 778 aaPredicted RBP8.98□□□□□ -0.97
CKAP2-201ENST00000258607 CKAP5Q14008 2032 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 A0A087X1B8 175 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 ILVBLA1L0T0 632 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 PRORSD1PA6NEY8 169 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 ZNF487B1APH4 448 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 WDR47O94967 919 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 PTNP21246 168 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 LHCGRP22888 699 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 SLC18A1P54219 525 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 SATB1Q01826 763 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 SYTL3Q4VX76 610 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 REP15Q6BDI9 236 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 RNF111Q6ZNA4 994 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 SYTL1Q8IYJ3 562 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 OR4F6Q8NGB9 312 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 ADAMTS19Q8TE59 1207 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 DLG3Q92796 817 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 EGLN2Q96KS0 407 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 APOLD1Q96LR9 279 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 KLHL25Q9H0H3 589 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 TUBB1Q9H4B7 451 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 FAM124BQ9H5Z6 455 aaPredicted RBP8.98□□□□□ -0.97
CKAP2-201ENST00000258607 FZD3Q9NPG1 666 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 PCDH12Q9NPG4 1184 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 POLG2Q9UHN1 485 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 ANGPTL2Q9UKU9 493 aa8.98□□□□□ -0.97
CKAP2-201ENST00000258607 OTOL1A6NHN0 477 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 MMP20O60882 483 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 NME6O75414 186 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 F11P03951 625 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 SRCP12931 536 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 LAG3P18627 525 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 POLR2EP19388 210 aaKnown RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 HOXC13P31276 330 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 CPOXP36551 454 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 YAP1P46937 504 aaKnown RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 DSG1Q02413 1049 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 CDC16Q13042 620 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 GCNT7Q6ZNI0 430 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 ITIH5Q86UX2 942 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 RETREG3Q86VR2 466 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 CHPFQ8IZ52 775 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 FBXW8Q8N3Y1 598 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 CANT1Q8WVQ1 401 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 PKP2Q99959 881 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 MACROD1Q9BQ69 325 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 IL21Q9HBE4 155 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 PAK6Q9NQU5 681 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 WDR70Q9NW82 654 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 TDRD6O60522 2096 aaKnown RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 LOC285095A0A1B0GVY8 99 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 K7ESM1 405 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 KLF11O14901 512 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 MAN1A2O60476 641 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 EPHX1P07099 455 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 G6PDP11413 515 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 MTHFD2P13995 350 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 ZNF7P17097 686 aaPredicted RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 CAPN3P20807 821 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 NR4A1P22736 598 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 BDKRB1P46663 353 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 ACAP2Q15057 778 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 PLCL1Q15111 1095 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 INSCQ1MX18 579 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 CAPRIN2Q6IMN6 1127 aaKnown RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 C12orf40Q86WS4 652 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 PDZD8Q8NEN9 1154 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 OR2AP1Q8NGE2 309 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 NMD3Q96D46 503 aaKnown RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 RNF145Q96MT1 663 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 TUBGCP5Q96RT8 1024 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 TSPAN18Q96SJ8 248 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 PRPF18Q99633 342 aaKnown RBP8.97□□□□□ -0.97
CKAP2-201ENST00000258607 KXD1Q9BQD3 176 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 MGME1Q9BQP7 344 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 LTB4R2Q9NPC1 389 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 LHX3Q9UBR4 397 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 ZNF212Q9UDV6 495 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 SLC25A13Q9UJS0 675 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 TBX21Q9UL17 535 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 DTNAQ9Y4J8 743 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 DMDP11532 3685 aa8.97□□□□□ -0.97
CKAP2-201ENST00000258607 TRPM6Q9BX84 2022 aa8.96□□□□□ -0.97
CKAP2-201ENST00000258607 DRGXA6NNA5 263 aa8.96□□□□□ -0.97
CKAP2-201ENST00000258607 LOC730098B7Z3J9 87 aa8.96□□□□□ -0.97
CKAP2-201ENST00000258607 SNRPB2P08579 225 aaKnown RBP8.96□□□□□ -0.97
CKAP2-201ENST00000258607 PABPC1P11940 636 aaKnown RBP8.96□□□□□ -0.97
CKAP2-201ENST00000258607 ME2P23368 584 aa8.96□□□□□ -0.97
CKAP2-201ENST00000258607 KPNA1P52294 538 aaPredicted RBP8.96□□□□□ -0.97
CKAP2-201ENST00000258607 PRKAA2P54646 552 aa8.96□□□□□ -0.97
CKAP2-201ENST00000258607 CDH15P55291 814 aa8.96□□□□□ -0.97
CKAP2-201ENST00000258607 KCNK10P57789 538 aa8.96□□□□□ -0.97
CKAP2-201ENST00000258607 ST8SIA6P61647 398 aa8.96□□□□□ -0.97
CKAP2-201ENST00000258607 HERVK_113P63132 956 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms