RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 LATS2Q9NRM7 1088 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 HEBP1Q9NRV9 189 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SYCE1LA8MT33 242 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SUPT3HB4E1H0 165 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 NEMP1O14524 444 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CCDC22O60826 627 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SUPT3HO75486 399 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 C6P13671 934 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 GFAPP14136 432 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ATP1B2P14415 290 aaPredicted RBP19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 RPL14P50914 215 aaKnown RBP19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 C2orf27AQ580R0 203 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 FRMD7Q6ZUT3 714 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 DET1Q7L5Y6 550 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 BTN2A2Q8WVV5 523 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 PANX3Q96QZ0 392 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 BTBD10Q9BSF8 475 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 GSTO2Q9H4Y5 243 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 TRPV5Q9NQA5 729 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 GEMIN8Q9NWZ8 242 aaKnown RBP19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 PIAS3Q9Y6X2 628 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CCDC189A1A4V9 331 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 MID1O15344 667 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 RECQL5O94762 991 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SIX3O95343 332 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 OR56A5P0C7T3 313 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 CREB5Q02930 508 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 CST6Q15828 149 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 ACSBG2Q5FVE4 666 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 VWA5B1Q5TIE3 1220 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 RINLQ6ZS11 566 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 PELI3Q8N2H9 469 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 AADATQ8N5Z0 425 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 RAB7BQ96AH8 199 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 STN1Q9H668 368 aaKnown RBP19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 COG4Q9H9E3 785 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 LIMD1Q9UGP4 676 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 TSR3Q9UJK0 312 aaKnown RBP19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 CAPN14A8MX76 684 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 MATN2O00339 956 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 MBTPS2O43462 519 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 MAGEC1O60732 1142 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 MMP20O60882 483 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SUPT7LO94864 414 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SNUPNO95149 360 aaKnown RBP19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 CALB2P22676 271 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 DGKAP23743 735 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 RGS4P49798 205 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 PON2Q15165 354 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 TMEM52BQ4KMG9 183 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SBSNQ6UWP8 590 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 TREML1Q86YW5 311 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SLC44A3Q8N4M1 653 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 GLYATL1Q969I3 302 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 DCUN1D1Q96GG9 259 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 UBE2ZQ9H832 354 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 FADS3Q9Y5Q0 445 aa19.39■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SOD1P00441 154 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 EGFP01133 1207 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 EZRP15311 586 aaKnown RBP19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 CCR7P32248 378 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 HK3P52790 923 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 GALNT1Q10472 559 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SMAD4Q13485 552 aaKnown RBP19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 TUBB3Q13509 450 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 UNC50Q53HI1 259 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 KIAA1211LQ6NV74 962 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 RALGPS2Q86X27 583 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 FBXO39Q8N4B4 442 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 MAPK15Q8TD08 544 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 DENND2DQ9H6A0 471 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 DNAJC28Q9NX36 388 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 TAS2R1Q9NYW7 299 aa19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 NKX1-2Q9UD57 310 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1A-201ENST00000162749 NCF1BA6NI72 391 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 NCF1CA8MVU1 366 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 CFAP99D6REC4 459 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 GSC2O15499 205 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SGTAO43765 313 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 KLK8O60259 260 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 SYNCRIPO60506 623 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 PEX11AO75192 247 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 ANP32DO95626 131 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 NCF1P14598 390 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 IDH3AP50213 366 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 TGFBIQ15582 683 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 TMEM196Q5HYL7 178 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 ZNF648Q5T619 568 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 AGBL4Q5VU57 503 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 ADAMTSL2Q86TH1 951 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 GPSM1Q86YR5 675 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 NUS1Q96E22 293 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 LRCH3Q96II8 777 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 RILPQ96NA2 401 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 ZFC3H1O60293 1989 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 COL6A3P12111 3177 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 LRRC14BA6NHZ5 514 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 K7ESM1 405 aa19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 RNASEH1O60930 286 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1A-201ENST00000162749 NTSR1P30989 418 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms