RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Ube2r2Q6ZWZ2 238 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Lrrc75bQ7TPD7 306 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Pcyox1lQ8C7K6 495 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Panx3Q8CEG0 392 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Mtmr14Q8VEL2 648 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Idh3bQ91VA7 384 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Tcaf2Q921K8 919 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cmtm7Q9ESD6 167 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Vmn1r49Q9WUF1 310 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Keap1Q9Z2X8 624 aaKnown RBP15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Zmynd12A2BGJ5 363 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gm340F6RGI3 1242 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Zw10O54692 779 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Mtnd2P03893 345 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cd2P08920 344 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 LynP25911 512 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Trpv5P69744 723 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Htr4P97288 388 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 MslnQ61468 625 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Casp9Q8C3Q9 454 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rab15Q8K386 212 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 MpstQ99J99 297 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ifi44lQ9BDB7 447 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Lrp5Q91VN0 1614 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Syndig1A2ANU3 258 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Pdzd7E9Q9W7 1021 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Zfp715G3X9T1 886 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Lsm3P62311 102 aaKnown RBP15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Slc6a3Q61327 619 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Klhl23Q6GQU2 558 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Exd1Q8CDF7 570 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Olfr342Q8VGK7 312 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Subh2bvQ9D9Z7 123 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Epb41l1Q9Z2H5 879 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Limk2O54785 638 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rps7P62082 194 aaKnown RBP15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cpne9Q1RLL3 553 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Adgre4Q91ZE5 689 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Chid1Q922Q9 393 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cyp2j9Q924D1 502 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Q9D454 513 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Spesp1Q9D5A0 399 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Wdr83Q9DAJ4 315 aaKnown RBP15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Dhx34Q9DBV3 1145 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Krt81Q9ERE2 481 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 St6galnac1Q9QZ39 526 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gm3636E9Q5P1 227 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Slc26a1P58735 704 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cyp4f37Q3V1F1 546 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Tlr12Q6QNU9 906 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Q8BZE1 841 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Guf1Q8C3X4 651 aaKnown RBP15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Chrna3Q8R4G9 499 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Fastkd2Q922E6 689 aaKnown RBP15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Themis3Q9CU24 569 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Fndc3c1Q6DFV6 1356 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Skint7A7XV04 395 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Slc9a3G3X939 829 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Map2k3O09110 347 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gbx2P48031 348 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Itga7Q61738 1179 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ints10Q8K2A7 710 aaKnown RBP15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Adgrf1Q8VEC3 908 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Olfr847Q8VFF4 312 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 B3galt6Q91Z92 325 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Q922R1 422 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ndufa5Q9CPP6 116 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cndp2Q9D1A2 475 aaKnown RBP15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Mrps15Q9DC71 258 aaKnown RBP15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Wfdc1Q9ESH5 211 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Slc5a3Q9JKZ2 718 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 FgaE9PV24 789 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gm16494E9Q2Z4 87 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Klrb1bP27812 223 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ppp3cbP48453 525 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 AdslP54822 484 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rrm2bQ6PEE3 351 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Bdh2Q8JZV9 245 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Irak3Q8K4B2 609 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Tspan33Q8R3S2 283 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cby3Q9CVN6 235 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 4933425L06RikQ9D3Z8 585 aa15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Nusap1Q9ERH4 427 aaKnown RBP15.38■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Slfn3A0A1L1STQ7 640 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Stk16O88697 305 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cdh1P09803 884 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Pdha2P35487 391 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 UcmaQ14BU0 138 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 LvrnQ2KHK3 559 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Pcdh19Q80TF3 1145 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cndp1Q8BUG2 492 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Tbc1d17Q8BYH7 645 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cox10Q8CFY5 443 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Mcfd2Q8K5B2 145 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 ItpkaQ8R071 459 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Aim2Q91VJ1 354 aaKnown RBP15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Golm1Q91XA2 393 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Dusp26Q9D700 211 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Oser1Q9D722 291 aa15.37■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Glod5Q9D8I3 148 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms