RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 PrccQ9EQC8 491 aaKnown RBP11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Plod2Q9R0B9 737 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm3594E9Q2A7 267 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Usp17ldG5E8G2 545 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Usp17lcG5E8I7 545 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Clec2lP0C7M9 211 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Aste1Q8BIR2 672 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp101Q8BP18 612 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Samd7Q8C8Y5 445 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ago3Q8CJF9 860 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 MpstQ99J99 297 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Jph1Q9ET80 660 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Robo1O89026 1612 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Has3O08650 554 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ly9Q01965 654 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Grb7Q03160 535 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Pik3r6Q3U6Q4 756 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cyth4Q80YW0 393 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Grhl1Q921D9 618 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Dcp2Q9CYC6 422 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Spesp1Q9D5A0 399 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Dnase1l1Q9D7J6 314 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Eif3kQ9DBZ5 218 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ing1Q9QXV3 279 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Acot2Q9QYR9 453 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 DnpepQ9Z2W0 473 aa11.83□□□□□ -0.51
Trim56-201ENSMUST00000054384 Astn1Q61137 1302 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mkrn2osD3Z393 217 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc22a2O70577 553 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 MogQ61885 246 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 C6.1alQ7M757 291 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr26Q7TRB7 308 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fut11Q8BHC9 489 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cadm2Q8BLQ9 435 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Dclre1cQ8K4J0 705 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Alg5Q9DB25 324 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ampd2Q9DBT5 798 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Hcar2Q9EP66 360 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr933Q9EQA0 308 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Myo10F8VQB6 2062 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ankle1A8VU90 534 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rab21P35282 222 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Nr5a2P45448 560 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 SgcdP82347 289 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mamdc2Q8CG85 686 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cstf1Q99LC2 431 aaKnown RBP11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Atp6ap2Q9CYN9 350 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mfsd2aQ9DA75 534 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Nectin3Q9JLB9 549 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Shank2Q80Z38 1476 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kbtbd6E9PYD7 486 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm3636E9Q5P1 227 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Scgb2b19J3QM75 112 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 AoahO35298 574 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Oprl1P35377 367 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tspan5P62080 268 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kif18bQ6PFD6 834 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr1062Q7TR71 315 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pcdh18Q8VHR0 1134 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Acsl6Q91WC3 697 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Znf639Q99KZ6 485 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Arl8bQ9CQW2 186 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fam212aQ9CX62 282 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 ApmapQ9D7N9 415 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 PtprmP28828 1452 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn2r49D3Z6L3 852 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn2r32K7N686 852 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cbx4O55187 551 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mid1O70583 680 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 TtkP35761 856 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ap1s1P61967 158 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mef2dQ63943 514 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rps9Q6ZWN5 194 aaKnown RBP11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Laptm4bQ91XQ6 227 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mrps33Q9D2R8 106 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Prorsd1Q9D820 169 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Neurl4Q5NCX5 1563 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Dhx15O35286 795 aaKnown RBP11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 B3galt2O54905 422 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Htr4P97288 388 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr1355Q7TQU9 310 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Q8BHG2 160 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 MastlQ8C0P0 865 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Yipf4Q8C407 246 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Nadk2Q8C5H8 452 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 OlahQ8R197 265 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kctd5Q8VC57 234 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Teddm3Q9CQH1 294 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tmbim4Q9DA39 238 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 UprtB1AVZ0 310 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pmm1O35621 262 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ddr1Q03146 911 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 CamkmtQ3U2J5 323 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tbx10Q810F8 385 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mrpl49Q9CQ40 166 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 KelQ9EQF2 713 aa11.83□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zfp612A0A1D5RMC2 672 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Inpp5aE9QAS7 422 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rpl7aP12970 266 aaKnown RBP11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gpr149Q3UVY1 732 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms