RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Vmn2r53L7N473 806 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp4a14O35728 507 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Alox8O35936 677 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dpep1P31428 410 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gpr149Q3UVY1 732 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Jak3Q62137 1100 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Scn3bQ8BHK2 215 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tmem220Q8BP07 167 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ints10Q8K2A7 710 aaKnown RBP11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr985Q8VGB4 311 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr589Q8VGV8 317 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Asb6Q91ZU1 418 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Q9CPZ3 230 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cldn19Q9ET38 224 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Il17rbQ9JIP3 499 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm35911A0A1D5RLS7 214 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm6133B2RY53 190 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vsig10lD3YZF7 868 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm19965J3QNY8 723 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 JundP15066 341 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 SpnP15702 395 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp37P17141 594 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Adamts1P97857 968 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Itga2Q62469 1178 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CbarpQ66L44 698 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ddx55Q6ZPL9 600 aaKnown RBP11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zbtb33Q8BN78 671 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Svs2Q8BS30 375 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Stk-ps2Q8C0V7 499 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc29a4Q8R139 528 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Riok2Q9CQS5 547 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ehd3Q9QXY6 535 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc22a4Q9Z306 553 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Dock5B2RY04 1868 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pramef25A2ASI9 494 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr414E9Q5P8 317 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Dusp2Q05922 318 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CrxosQ3UL53 246 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Prrg3Q6PAQ9 231 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cdc14bQ6PFY9 485 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr1085Q7TR64 313 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 RragdQ7TT45 449 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Prickle2Q80Y24 845 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cdkn2aipQ8BI72 563 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Adnp2Q8CHC8 1165 aaKnown RBP11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rnf219Q8K2Y0 722 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr695Q8VFM3 315 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Msh4Q99MT2 958 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cby3Q9CVN6 235 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Spock2Q9ER58 423 aa11.21□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gucy2dA0A0U1RPR8 1117 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm3488M0QW81 238 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 SpibO35906 267 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Btnl2O70355 454 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fth1P09528 182 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CratP47934 626 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gadd45aP48316 165 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Btbd3P58545 530 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Smad5P97454 465 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Kcnj8P97794 424 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 HiraQ61666 1015 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Insm1Q63ZV0 521 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Abcg1Q64343 666 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Szrd1Q6NXN1 152 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sox11Q7M6Y2 395 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 4931406P16RikQ8C5X1 1059 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Prmt5Q8CIG8 637 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Txndc11Q8K2W3 948 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pcdhb11Q91UZ8 797 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 AclyQ91V92 1091 aaKnown RBP11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Chil4Q91Z98 402 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Q9CXL3 195 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sipa1l3G3X9J0 1776 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr1215A3KGY3 312 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rpl3lE9PWZ3 407 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hsd17b10O08756 261 aaKnown RBP11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 DmpkP54265 631 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ybx1P62960 322 aaKnown RBP11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Il6stQ00560 917 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sec31bQ3TZ89 1158 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tmem151aQ6GQT5 468 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Thoc7Q7TMY4 204 aaKnown RBP11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Trnp1Q80ZI1 223 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 B3gnt7Q8K0J2 397 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Chst15Q91XQ5 561 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fabp12Q9DAK4 132 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CtszQ9WUU7 306 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Klhdc7bA0A286YD60 1263 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Kdelc2G5E897 503 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sgo2bJ3QMK1 1167 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp28P10078 825 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hmx2P43687 273 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cpa4Q6P8K8 420 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rcn3Q8BH97 328 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr273Q8VG87 317 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tmem9Q9CR23 183 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rfc5Q9D0F6 339 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Armc1Q9D7A8 282 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 4933424G06RikA0A140LIP3 267 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm5478D3Z6R0 159 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms