RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Snx32Q80ZJ7 404 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Fbxo30Q8BJL1 746 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Sit1Q8C503 180 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 SntnQ8C9X1 147 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Pwp1Q99LL5 501 aaKnown RBP10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 AadacQ99PG0 398 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Tex46Q9CPU3 165 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Smok1Q9QYZ4 484 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Tex28B1AYN9 409 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Rnf169E9Q7F2 694 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Sipa1l3G3X9J0 1776 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Gpr25P0C5I1 358 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Asgr1P34927 284 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Hoxd13P70217 339 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 StimateQ3UF25 288 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Tnfaip2Q61333 691 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Eif2b4Q61749 524 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Aldh1a2Q62148 518 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Usp7Q6A4J8 1103 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Naa50Q6PGB6 169 aaKnown RBP10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Clec7aQ6QLQ4 244 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Cyp2r1Q6VVW9 501 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Rfx4Q7TNK1 735 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Rxfp4Q7TQP4 414 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Olfr533Q7TRT7 320 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Cxcr1Q810W6 351 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Gpc2Q8BKV1 579 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Dmtf1Q8CE22 761 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Fate1Q8CEK7 99 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Socs7Q8VHQ2 579 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 NlnQ91YP2 704 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Tmem114Q9D563 222 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Haus5Q9D786 619 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 H2bfmQ9DAB5 224 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Copg1Q9QZE5 874 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Scn1aA2APX8 2009 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Scn9aQ62205 1984 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 C4bP01029 1738 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Gm28363A0A087WQW2 129 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Olfr675A0A1B0GSE1 317 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Smok4aA0JLX3 433 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 S100zB9EJL3 99 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 MndalD0QMC3 538 aaKnown RBP10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Dcpp2E9PYC2 171 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Dcpp1L7N1X9 171 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 NoctO35710 429 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Hrh2P97292 397 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Dnajb14Q149L6 379 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 LcorlQ3U285 600 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Cyp2j13Q3UNV4 503 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Zbtb2Q3V3W4 514 aaKnown RBP10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Clec4a4Q5YIR8 236 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Ei24Q61070 340 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Prox2Q8BII1 593 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Palm2Q8BR92 376 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 UstQ8BUB6 407 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Ace2Q8R0I0 805 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Micu1Q8VCX5 477 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Ankrd54Q91WK7 299 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Lrrc40Q9CRC8 602 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Mcm8Q9CWV1 833 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Tmem80Q9D3H0 123 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Slc5a3Q9JKZ2 718 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Acsl4Q9QUJ7 711 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Adam23Q9R1V7 829 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Mapk9Q9WTU6 423 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 FAM186AQ9D9R9 1790 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Vmn1r3A2AMT7 306 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 BC035947B2RQY6 695 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Zfp715G3X9T1 886 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Kpna4O35343 521 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Tnk2O54967 1055 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Cct7P80313 544 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Anxa4P97429 319 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Gsdmc2Q2KHK6 480 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Ccser2Q3UHI0 833 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Naa11Q3UX61 218 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Ephx3Q3V1F8 367 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Mrm3Q5ND52 418 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Six3Q62233 333 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 PigaQ64323 485 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Tmcc2Q80W04 706 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Mup21Q80YX8 181 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Sephs1Q8BH69 392 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Gsdmc3Q8CB12 480 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Vmn1r79Q8R285 306 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Hddc3Q9D114 179 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Armc8Q9DBR3 673 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Rab13Q9DD03 202 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Clcn5Q9WVD4 746 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Smim17A0A504 109 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Skint1A7TZE6 364 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Vmn2r73D3Z7M3 851 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Gml2G5E8L7 176 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Gria2P23819 883 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Rpl36P47964 105 aaKnown RBP10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Arpc4P59999 168 aaKnown RBP10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Tdrd6P61407 2134 aa10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Snrpd1P62315 119 aaKnown RBP10.76□□□□□ -0.69
Msh3-201ENSMUST00000022220 Lrig1P70193 1091 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms