RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 GJB3O75712 270 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SULT1C4O75897 302 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 RBP1P09455 135 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF24P17028 368 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 PSMB9P28065 219 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 IFNA8P32881 189 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 GJA8P48165 433 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 WNT3AP56704 352 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ATP6V0D1P61421 351 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 IL5RAQ01344 420 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SF3B4Q15427 424 aaKnown RBP eCLIP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 KCNJ8Q15842 424 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 INAQ16352 499 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TTC23LQ6PF05 361 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ISCA2Q86U28 154 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CLIP4Q8N3C7 705 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 FAM86B1Q8N7N1 296 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TOP1MTQ969P6 601 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 B3GALT6Q96L58 329 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TBATAQ96M53 351 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 NSMCE2Q96MF7 247 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 BDH2Q9BUT1 245 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TOR3AQ9H497 397 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 IMPAD1Q9NX62 359 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TUBA8Q9NY65 449 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SPASTQ9UBP0 616 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CRLS1Q9UJA2 301 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CCDC154A6NI56 674 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 AQP12BA6NM10 295 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 HNRNPCL2B2RXH8 293 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SCAMP3O14828 347 aaKnown RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 GNRH1P01148 92 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 HLA-DQB2P05538 268 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 INHBBP09529 407 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 MBL2P11226 248 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 IMPDH1P20839 514 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TCEA1P23193 301 aaKnown RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 HTR1BP28222 390 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 HOXA11P31270 313 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TTKP33981 857 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CD86P42081 329 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 MTHFRP42898 656 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 AGTR2P50052 363 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 HLCSP50747 726 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 IFITM3Q01628 133 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 RAD51Q06609 339 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 VAC14Q08AM6 782 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CBLBQ13191 982 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SIM2Q14190 667 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF678Q5SXM1 525 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 MFSD4BQ5TF39 518 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 FAM171A1Q5VUB5 890 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 DENND5AQ6IQ26 1287 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 UNC93AQ86WB7 457 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 AQP12AQ8IXF9 295 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 OR13F1Q8NGS4 319 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF420Q8TAQ5 688 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TRUB1Q8WWH5 349 aaKnown RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 LPPQ93052 612 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SH3YL1Q96HL8 342 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 FAR2Q96K12 515 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CYP2S1Q96SQ9 504 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 UHRF1Q96T88 793 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 HOPXQ9BPY8 73 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ADAMTS10Q9H324 1103 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 TUBB1Q9H4B7 451 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 GLOD4Q9HC38 313 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ZC4H2Q9NQZ6 224 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 GIN1Q9NXP7 522 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 RCOR3Q9P2K3 495 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 MTRRQ9UBK8 725 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 FBXW11Q9UKB1 542 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CDH7Q9ULB5 785 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 MOXD2PA6NHM9 499 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 MEIS3P2A8K0S8 358 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 NDUFB5O43674 189 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SNAI1O95863 264 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 F9P00740 461 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CCDC159P0C7I6 412 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 LBPP18428 481 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SOAT1P35610 550 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 PIGAP37287 484 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 PIK3CGP48736 1102 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 AFF1P51825 1210 aaKnown RBP6.89□□□□□ -1.31
NEDD9-216ENST00000620854 HK2P52789 917 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ARSFP54793 590 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 LILRA4P59901 499 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 PAQR9Q6ZVX9 377 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 LRRC8DQ7L1W4 858 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 PAGE2Q7Z2X7 111 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ZDHHC13Q8IUH4 622 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CDYL2Q8N8U2 506 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 FNDC5Q8NAU1 212 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SCAMP5Q8TAC9 235 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 ITFG1Q8TB96 612 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CNIH3Q8TBE1 160 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 FRS2Q8WU20 508 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 FEM1AQ9BSK4 669 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SLC39A8Q9C0K1 460 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 SPATA7Q9P0W8 599 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms