RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 C1QTNF3-AMACRE9PGA6 284 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 PEX1O43933 1283 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CRCPO75575 148 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 IL1AP01583 271 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 RNASE1P07998 156 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 EGR2P11161 476 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CERS1P27544 350 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 PBX1P40424 430 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GARSP41250 739 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 MAGEA10P43363 369 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ILF2Q12905 390 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 IRF3Q14653 427 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 LCE2AQ5TA79 106 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TMEM108Q6UXF1 575 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 AMIGO1Q86WK6 493 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 BATF2Q8N1L9 274 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 OR52J3Q8NH60 311 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TCP11Q8WWU5 503 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 FER1L6-AS2Q96M78 137 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 PLEKHG4BQ96PX9 1271 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 OMDQ99983 421 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 MXD3Q9BW11 206 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GPN1Q9HCN4 374 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 NOX4Q9NPH5 578 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 C2orf42Q9NWW7 574 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ELF5Q9UKW6 265 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 SRPRBQ9Y5M8 271 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 PNPLA7Q6ZV29 1317 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 A0A1W2PQF6 199 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 H3BTX0 84 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 DCLK1O15075 740 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GRID2O43424 1007 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TTLL1O95922 423 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ADAP00813 363 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 PCP11498 1178 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TACR2P21452 398 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CYP2J2P51589 502 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 MLLT10P55197 1068 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 SEC61A1P61619 476 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 RESTQ13127 1097 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CUL3Q13618 768 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 WDR43Q15061 677 aaKnown RBP eCLIP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 USF2Q15853 346 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ACSF3Q4G176 576 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GPATCH4Q5T3I0 446 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 KRT39Q6A163 491 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 SLC22A25Q6T423 547 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CLEC9AQ6UXN8 241 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ZPBP2Q6X784 338 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 RHOUQ7L0Q8 258 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TRPM8Q7Z2W7 1104 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 NANOGNBQ7Z5D8 188 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GPR180Q86V85 440 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 C17orf53Q8N3J3 647 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 OR10T2Q8NGX3 314 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TUBGCP3Q96CW5 907 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 HAPLN3Q96S86 360 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 POLR3CQ9BUI4 534 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 STOX2Q9P2F5 926 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CPSF3Q9UKF6 684 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TMED5Q9Y3A6 229 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 EPN1Q9Y6I3 576 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 PTCH1Q13635 1447 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 DPPA5A6NC42 116 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 BTBD18B2RXH4 712 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 UBXN8O00124 270 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ADAMDEC1O15204 470 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 SPINT2O43291 252 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TNFRSF6BO95407 300 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ST6GAL1P15907 406 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 FGFR4P22455 802 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ARSFP54793 590 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ELLP55199 621 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CSNK2A1P68400 391 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GUCY1B3Q02153 619 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CACNG1Q06432 222 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 DLX2Q07687 328 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 SLC10A2Q12908 348 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 MELKQ14680 651 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GRM7Q14831 915 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 VEPH1Q14D04 833 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 PTPAQ15257 358 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 OASLQ15646 514 aaKnown RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 PNLIPRP3Q17RR3 467 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ASPRV1Q53RT3 343 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 NHLRC1Q6VVB1 395 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TRAPPC11Q7Z392 1133 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 SPRED2Q7Z698 418 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 RANBP3LQ86VV4 465 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-207ENST00000614259 LSMEM2Q8N112 164 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GATSQ8NAP1 163 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CSNK2A3Q8NEV1 391 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 OCC1Q8TAD7 63 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 LINC00476Q8WZB0 136 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 GAL3ST1Q99999 423 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 WDR11Q9BZH6 1224 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 TM6SF1Q9BZW5 370 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 SDCBP2Q9H190 292 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 CDH20Q9HBT6 801 aa1.56□□□□□ -2.16
BRCA2-207ENST00000614259 ABT1Q9ULW3 272 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms