RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 CHIC1Q5VXU3 224 aa4.89□□□□□ -1.63
BRCA2-207ENST00000614259 AEBP2Q6ZN18 517 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-207ENST00000614259 PLPPR3Q6T4P5 718 aa4.16□□□□□ -1.74
BRCA2-207ENST00000614259 PHF23Q9BUL5 403 aaPredicted RBP4.09□□□□□ -1.76
BRCA2-207ENST00000614259 SENP3Q9H4L4 574 aaPredicted RBP4.08□□□□□ -1.76
BRCA2-207ENST00000614259 DNAJC5BQ9UF47 199 aa3.85□□□□□ -1.79
BRCA2-207ENST00000614259 NCBP3Q53F19 620 aaKnown RBP3.84□□□□□ -1.8
BRCA2-207ENST00000614259 AMER1Q5JTC6 1135 aaPredicted RBP3.68□□□□□ -1.82
BRCA2-207ENST00000614259 SCAF1Q9H7N4 1312 aaKnown RBP3.67□□□□□ -1.82
BRCA2-207ENST00000614259 SLC4A1APQ9BWU0 796 aaKnown RBP3.65□□□□□ -1.82
BRCA2-207ENST00000614259 ATXN8OSP0DMR3 200 aa3.62□□□□□ -1.83
BRCA2-207ENST00000614259 KCNA4P22459 653 aa3.61□□□□□ -1.83
BRCA2-207ENST00000614259 SLC24A1O60721 1099 aa3.59□□□□□ -1.84
BRCA2-207ENST00000614259 PPP4R3CPQ6ZMV5 832 aa3.58□□□□□ -1.84
BRCA2-207ENST00000614259 CSRNP3Q8WYN3 585 aa3.57□□□□□ -1.84
BRCA2-207ENST00000614259 ERICH6Q7L0X2 663 aa3.57□□□□□ -1.84
BRCA2-207ENST00000614259 CNKSR2Q8WXI2 1034 aa3.56□□□□□ -1.84
BRCA2-207ENST00000614259 EHMT2Q96KQ7 1210 aa3.53□□□□□ -1.85
BRCA2-207ENST00000614259 FOXD1Q16676 465 aa3.5□□□□□ -1.85
BRCA2-207ENST00000614259 FOXD4L1Q9NU39 408 aa3.49□□□□□ -1.85
BRCA2-207ENST00000614259 ADRA2BP18089 450 aa3.46□□□□□ -1.86
BRCA2-207ENST00000614259 APLP2Q06481 763 aa3.45□□□□□ -1.86
BRCA2-207ENST00000614259 NPM3O75607 178 aaKnown RBP3.44□□□□□ -1.86
BRCA2-207ENST00000614259 RNF216Q9NWF9 866 aaPredicted RBP3.44□□□□□ -1.86
BRCA2-207ENST00000614259 PPP6R1Q9UPN7 881 aa3.43□□□□□ -1.86
BRCA2-207ENST00000614259 MSH5O43196 834 aa3.43□□□□□ -1.86
BRCA2-207ENST00000614259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-207ENST00000614259 HNRNPUL2Q1KMD3 747 aaKnown RBP3.41□□□□□ -1.86
BRCA2-207ENST00000614259 FBXO3Q9UK99 471 aa3.4□□□□□ -1.87
BRCA2-207ENST00000614259 MYCNP04198 464 aaPredicted RBP3.38□□□□□ -1.87
BRCA2-207ENST00000614259 PIAS4Q8N2W9 510 aaPredicted RBP3.36□□□□□ -1.87
BRCA2-207ENST00000614259 HOXD11P31277 338 aaPredicted RBP3.34□□□□□ -1.87
BRCA2-207ENST00000614259 VSIG10Q8N0Z9 540 aa3.33□□□□□ -1.88
BRCA2-207ENST00000614259 SAMD1Q6SPF0 538 aaPredicted RBP3.31□□□□□ -1.88
BRCA2-207ENST00000614259 BCANQ96GW7 911 aa3.3□□□□□ -1.88
BRCA2-207ENST00000614259 DAXXQ9UER7 740 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-207ENST00000614259 TRIM41Q8WV44 630 aa3.27□□□□□ -1.89
BRCA2-207ENST00000614259 RTN4Q9NQC3 1192 aaKnown RBP3.26□□□□□ -1.89
BRCA2-207ENST00000614259 DMRT2Q9Y5R5 561 aa3.26□□□□□ -1.89
BRCA2-207ENST00000614259 TAOK2Q9UL54 1235 aa3.24□□□□□ -1.89
BRCA2-207ENST00000614259 POTEDQ86YR6 584 aa3.24□□□□□ -1.89
BRCA2-207ENST00000614259 ZBTB22O15209 634 aa3.23□□□□□ -1.89
BRCA2-207ENST00000614259 PROM2Q8N271 834 aa3.23□□□□□ -1.89
BRCA2-207ENST00000614259 ZBTB12Q9Y330 459 aaPredicted RBP3.22□□□□□ -1.89
BRCA2-207ENST00000614259 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.21□□□□□ -1.9
BRCA2-207ENST00000614259 PLCB2Q00722 1185 aa3.21□□□□□ -1.9
BRCA2-207ENST00000614259 STAG3Q9UJ98 1225 aa3.2□□□□□ -1.9
BRCA2-207ENST00000614259 DNAJC5Q9H3Z4 198 aa3.19□□□□□ -1.9
BRCA2-207ENST00000614259 BBXQ8WY36 941 aaPredicted RBP3.18□□□□□ -1.9
BRCA2-207ENST00000614259 ARXQ96QS3 562 aa3.18□□□□□ -1.9
BRCA2-207ENST00000614259 FKBP8Q14318 412 aa3.18□□□□□ -1.9
BRCA2-207ENST00000614259 ZBTB47Q9UFB7 747 aaPredicted RBP3.17□□□□□ -1.9
BRCA2-207ENST00000614259 RYDENQ9NUL5 291 aaKnown RBP3.17□□□□□ -1.9
BRCA2-207ENST00000614259 FBLN2P98095 1184 aa3.15□□□□□ -1.91
BRCA2-207ENST00000614259 SLC4A2P04920 1241 aa3.13□□□□□ -1.91
BRCA2-207ENST00000614259 SPOCK2Q92563 424 aa3.09□□□□□ -1.91
BRCA2-207ENST00000614259 VASPP50552 380 aaPredicted RBP3.09□□□□□ -1.92
BRCA2-207ENST00000614259 SGIP1Q9BQI5 828 aa3.09□□□□□ -1.92
BRCA2-207ENST00000614259 PLEKHG5O94827 1062 aa3.08□□□□□ -1.92
BRCA2-207ENST00000614259 ZNF219Q9P2Y4 722 aaPredicted RBP3.08□□□□□ -1.92
BRCA2-207ENST00000614259 TMEM132AQ24JP5 1023 aa3.07□□□□□ -1.92
BRCA2-207ENST00000614259 SPRYD3Q8NCJ5 442 aa3.06□□□□□ -1.92
BRCA2-207ENST00000614259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.06□□□□□ -1.92
BRCA2-207ENST00000614259 SPDYE4A6NLX3 237 aa3.05□□□□□ -1.92
BRCA2-207ENST00000614259 P3H3Q8IVL6 736 aa3.04□□□□□ -1.92
BRCA2-207ENST00000614259 TULP1O00294 542 aaPredicted RBP3.03□□□□□ -1.92
BRCA2-207ENST00000614259 CHRM1P11229 460 aaPredicted RBP3.03□□□□□ -1.92
BRCA2-207ENST00000614259 GSE1Q14687 1217 aa3.03□□□□□ -1.92
BRCA2-207ENST00000614259 SPDYE2BA6NHP3 402 aa3.02□□□□□ -1.93
BRCA2-207ENST00000614259 SPDYE6P0CI01 402 aa3.02□□□□□ -1.93
BRCA2-207ENST00000614259 HAP1P54257 671 aaPredicted RBP3.02□□□□□ -1.93
BRCA2-207ENST00000614259 SPDYE2Q495Y8 402 aa3.02□□□□□ -1.93
BRCA2-207ENST00000614259 NBR1Q14596 966 aa3.01□□□□□ -1.93
BRCA2-207ENST00000614259 HOMEZQ8IX15 550 aa3□□□□□ -1.93
BRCA2-207ENST00000614259 HS6ST3Q8IZP7 471 aa3□□□□□ -1.93
BRCA2-207ENST00000614259 ECM2O94769 699 aaPredicted RBP2.98□□□□□ -1.93
BRCA2-207ENST00000614259 MAPK8IP2Q13387 824 aaPredicted RBP2.97□□□□□ -1.93
BRCA2-207ENST00000614259 PKD2Q13563 968 aa2.97□□□□□ -1.93
BRCA2-207ENST00000614259 C1QBPQ07021 282 aaKnown RBP2.97□□□□□ -1.93
BRCA2-207ENST00000614259 PDE4CQ08493 712 aa2.95□□□□□ -1.94
BRCA2-207ENST00000614259 U3KPZ7 1027 aaPredicted RBP2.95□□□□□ -1.94
BRCA2-207ENST00000614259 SMYD5Q6GMV2 418 aa2.94□□□□□ -1.94
BRCA2-207ENST00000614259 KLHL34Q8N239 644 aa2.94□□□□□ -1.94
BRCA2-207ENST00000614259 ARIH1Q9Y4X5 557 aaPredicted RBP2.94□□□□□ -1.94
BRCA2-207ENST00000614259 IFNLR1Q8IU57 520 aaPredicted RBP2.94□□□□□ -1.94
BRCA2-207ENST00000614259 GTF3C3Q9Y5Q9 886 aa2.94□□□□□ -1.94
BRCA2-207ENST00000614259 SSUH2Q9Y2M2 353 aa2.94□□□□□ -1.94
BRCA2-207ENST00000614259 VGFO15240 615 aaPredicted RBP2.93□□□□□ -1.94
BRCA2-207ENST00000614259 TPRNQ4KMQ1 711 aa2.92□□□□□ -1.94
BRCA2-207ENST00000614259 PAXIP1Q6ZW49 1069 aaPredicted RBP2.91□□□□□ -1.94
BRCA2-207ENST00000614259 PATL2C9JE40 543 aaKnown RBP2.9□□□□□ -1.95
BRCA2-207ENST00000614259 ARHGEF1Q92888 912 aaKnown RBP2.89□□□□□ -1.95
BRCA2-207ENST00000614259 KDM2AQ9Y2K7 1162 aa2.89□□□□□ -1.95
BRCA2-207ENST00000614259 PLCD3Q8N3E9 789 aa2.88□□□□□ -1.95
BRCA2-207ENST00000614259 RANGAP1P46060 587 aaPredicted RBP2.88□□□□□ -1.95
BRCA2-207ENST00000614259 NPM1P06748 294 aaKnown RBP eCLIP2.88□□□□□ -1.95
BRCA2-207ENST00000614259 RIOK3O14730 519 aaKnown RBP2.88□□□□□ -1.95
BRCA2-207ENST00000614259 MKRN4PQ13434 485 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-207ENST00000614259 MIER1Q8N108 512 aa2.87□□□□□ -1.95
BRCA2-207ENST00000614259 WDR70Q9NW82 654 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms