RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TMEM221A6NGB7 291 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CYP7B1O75881 506 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 MYO1DO94832 1006 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TMEM63AO94886 807 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TGDSO95455 350 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TFEBP19484 476 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 GCAP28676 217 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 MYBPC1Q00872 1141 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SLC25A11Q02978 314 aaKnown RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 NR6A1Q15406 480 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 AMZ1Q400G9 498 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CCDC153Q494R4 210 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CCDC103Q8IW40 242 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SLC39A11Q8N1S5 342 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 WDR48Q8TAF3 677 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CPT1BQ92523 772 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 NCSTNQ92542 709 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SCAMP4Q969E2 229 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 HGH1Q9BTY7 390 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 DRG1Q9Y295 367 aaKnown RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CLUHO75153 1309 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CLOCKO15516 846 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 MMP20O60882 483 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 PRAMEF1O95521 474 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 HLA-DQB2P05538 268 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 HOXB2P14652 356 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 ITPKAP23677 461 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 NMBRP28336 390 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 NEK2P51955 445 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 FBXW4P57775 412 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 DNASE1L3Q13609 305 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 PCID2Q5JVF3 399 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TRNP1Q6NT89 227 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 ZCCHC7Q8N3Z6 543 aaKnown RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 GPR156Q8NFN8 814 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 LRTOMTQ8WZ04 291 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CXorf40BQ96DE9 158 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 IL22Q9GZX6 179 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 EHD1Q9H4M9 534 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 ELOVL6Q9H5J4 265 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 FBXL12Q9NXK8 326 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SH3BP4Q9P0V3 963 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SCHIP1Q9P0W5 487 aaPredicted RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 OGDHLQ9ULD0 1010 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 PLLPQ9Y342 182 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TIPRLO75663 272 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 OR56A5P0C7T3 313 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 CYP2A6P11509 494 aaPredicted RBP10.74□□□□□ -0.69
FAM3A-221ENST00000612856 TCEA1P23193 301 aaKnown RBP10.74□□□□□ -0.69
FAM3A-221ENST00000612856 RCVRNP35243 200 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 XIAPP98170 497 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 CD300CQ08708 224 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 RALGDSQ12967 914 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 SNX29P2Q8IUI4 249 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 CFAP206Q8IYR0 622 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 MPP5Q8N3R9 675 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 ZMIZ2Q8NF64 920 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 FEM1CQ96JP0 617 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 SMIM14Q96QK8 99 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 VAT1Q99536 393 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 NPAS2Q99743 824 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 PCDHAC1Q9H158 963 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 EPS8L2Q9H6S3 715 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 WDR41Q9HAD4 459 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 CLK4Q9HAZ1 481 aaKnown RBP10.74□□□□□ -0.69
FAM3A-221ENST00000612856 GIN1Q9NXP7 522 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 TLR6Q9Y2C9 796 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF839A8K0R7 811 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 M0R3G1 203 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 CTSAP10619 480 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 PGAM1P18669 254 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 GMPRP36959 345 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 CDH4P55283 916 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 DAB2P98082 770 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 ZIK1Q3SY52 487 aaPredicted RBP10.74□□□□□ -0.69
FAM3A-221ENST00000612856 TMEM240Q5SV17 173 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 RNASEH2BQ5TBB1 312 aaKnown RBP10.74□□□□□ -0.69
FAM3A-221ENST00000612856 TDRPQ86YL5 185 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 FBXO39Q8N4B4 442 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 METTL6Q8TCB7 284 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 FGF13Q92913 245 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 MOCOSQ96EN8 888 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 RNF38Q9H0F5 515 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 MID1IP1Q9NPA3 183 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 LINC01553A4QN01 128 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 HACD1B0YJ81 288 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 LDB2O43679 373 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 B4GALT3O60512 393 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 BAIAP3O94812 1187 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 H6PDO95479 791 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 ITGAXP20702 1163 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 GSTM4Q03013 218 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 RSBN1Q5VWQ0 802 aaPredicted RBP10.74□□□□□ -0.69
FAM3A-221ENST00000612856 ADCK1Q86TW2 530 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 C10orf107Q8IVU9 208 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 AHI1Q8N157 1196 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 TSTD1Q8NFU3 115 aa10.74□□□□□ -0.69
FAM3A-221ENST00000612856 TOX2Q96NM4 488 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms