RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 SYT16Q17RD7 645 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 ACTBL2Q562R1 376 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 TTC27Q6P3X3 843 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 GDPD3Q7L5L3 318 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 LHFPL4Q7Z7J7 247 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 CNGA4Q8IV77 575 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 NXPE1Q8N323 547 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 DNAJC5GQ8N7S2 189 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 OR13C3Q8NGS6 347 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 SETD7Q8WTS6 366 aaKnown RBP5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 OTUB2Q96DC9 234 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 FBXO17Q96EF6 278 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 CCDC51Q96ER9 411 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 CCDC120Q96HB5 630 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 SERAC1Q96JX3 654 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 SSX3Q99909 188 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 FAM118BQ9BPY3 351 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 EXO5Q9H790 373 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 MRPL44Q9H9J2 332 aaKnown RBP5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 TMEM160Q9NX00 188 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 SARDHQ9UL12 918 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 CA14Q9ULX7 337 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 PCDHB5Q9Y5E4 795 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 PCDHGC4Q9Y5F7 938 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 SPATA31A5Q5VU36 1347 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 SPATA31A7Q8IWB4 1347 aa5.77□□□□□ -1.49
COL4A3BP-207ENST00000604926 TMEM238C9JI98 176 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 TMX2-CTNND1H3BSU7 103 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 PDGFAP04085 211 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 H2AFB2P0C5Z0 115 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ETS1P14921 441 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 TSHRP16473 764 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 MSH3P20585 1137 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 CPT2P23786 658 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 BAG6P46379 1132 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 OMPP47874 163 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 OR3A3P47888 321 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 AKR1D1P51857 326 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 PGDP52209 483 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 NOMO3P69849 1222 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 GRB7Q14451 532 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 MESDQ14696 234 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 GRM7Q14831 915 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 LARS2Q15031 903 aaKnown RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 TRIM61Q5EBN2 209 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 NOMO2Q5JPE7 1267 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 TEX30Q5JUR7 227 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 VITQ6UXI7 678 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 IL20RBQ6UXL0 311 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 SLC26A9Q7LBE3 791 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 CYP4Z1Q86W10 505 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 CCDC103Q8IW40 242 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ADHFE1Q8IWW8 467 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 UBL4BQ8N7F7 174 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 Q8N9G6 341 aaPredicted RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 BRI3BPQ8WY22 251 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 EDAQ92838 391 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 EXOSC8Q96B26 276 aaKnown RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ERLEC1Q96DZ1 483 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 TMEM80Q96HE8 168 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ZNF317Q96PQ6 595 aaPredicted RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 LGMNQ99538 433 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 TMEM246Q9BRR3 403 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 TUBGCP2Q9BSJ2 902 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 PIGUQ9H490 435 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 PRDM13Q9H4Q3 707 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 TMEM8AQ9HCN3 771 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 COA4Q9NYJ1 87 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 CNIH4Q9P003 139 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 CHRNA9Q9UGM1 479 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 COLQQ9Y215 455 aaPredicted RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 PRELID3BQ9Y3B1 194 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 PCDHAC2Q9Y5I4 1007 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 NPHP3Q7Z494 1330 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 A0A1W2PQ72 361 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ILVBLA1L0T0 632 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 FAM234BA2RU67 622 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 EFCAB7A8K855 629 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 CCNT2O60583 730 aaKnown RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 FBXO24O75426 580 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ZNF821O75541 412 aaPredicted RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 PGK2P07205 417 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 CSF1P09603 554 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 NT5EP21589 574 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 SHMT2P34897 504 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ADCYAP1R1P41586 468 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ALDH9A1P49189 494 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 EIF6P56537 245 aaKnown RBP5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 CAPSQ13938 189 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 MFSD13AQ14CX5 517 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 KCNMB1Q16558 191 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ZNF484Q5JVG2 852 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 ARMCX5Q6P1M9 558 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 SSX9Q7RTT3 188 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 SLCO6A1Q86UG4 719 aa5.76□□□□□ -1.49
COL4A3BP-207ENST00000604926 IQCHQ86VS3 1027 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms