RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 APOL1O14791 398 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 IDSP22304 550 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 DNASE1L3Q13609 305 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 NOMO1Q15155 1222 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 SLC14A2Q15849 920 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 ATP13A5Q4VNC0 1218 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 WASH2PQ6VEQ5 465 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 TRAPPC5Q8IUR0 188 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 CT55Q8WUE5 264 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 IQCDQ96DY2 449 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 RUFY1Q96T51 708 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 GLOD4Q9HC38 313 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 WASH6PQ9NQA3 447 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 UBP1Q9NZI7 540 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 EPHA6Q9UF33 1036 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 MAN2B2Q9Y2E5 1009 aa16.05■□□□□ 0.16
LIG1-205ENST00000593425 TNRC6AQ8NDV7 1962 aaKnown RBP16.04■□□□□ 0.16
LIG1-205ENST00000593425 MKRN2OSH3BPM6 223 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 GPR39O43194 453 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 PMPCBO75439 489 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 CREG1O75629 220 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 NDST3O95803 873 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 PDGFAP04085 211 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 GP1BBP13224 206 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 NELFEP18615 380 aaKnown RBP16.04■□□□□ 0.16
LIG1-205ENST00000593425 CA5AP35218 305 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 MLLT10P55197 1068 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 TMEM115Q12893 351 aaPredicted RBP16.04■□□□□ 0.16
LIG1-205ENST00000593425 PDK1Q15118 436 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 SLC18A3Q16572 532 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.04■□□□□ 0.16
LIG1-205ENST00000593425 TCTN3Q6NUS6 607 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 PPP1R3BQ86XI6 285 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 RBM12BQ8IXT5 1001 aaKnown RBP16.04■□□□□ 0.16
LIG1-205ENST00000593425 ZDHHC12Q96GR4 267 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 RAB33BQ9H082 229 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 LHX9Q9NQ69 397 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 IFNKQ9P0W0 207 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 LCMT1Q9UIC8 334 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 KCND3Q9UK17 655 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 TLK1Q9UKI8 766 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 PCDHGA6Q9Y5G7 932 aa16.04■□□□□ 0.16
LIG1-205ENST00000593425 A0A0A6YYK5 440 aaPredicted RBP16.03■□□□□ 0.16
LIG1-205ENST00000593425 IGHV5-51A0A0C4DH38 117 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 SYCE3A1L190 88 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 PPP1R12AO14974 1030 aaPredicted RBP16.03■□□□□ 0.16
LIG1-205ENST00000593425 RFPL1O75677 317 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 DNAJB5O75953 348 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 KRT1P04264 644 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 TMEM253P0C7T8 217 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 FOLR1P15328 257 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 PTPN3P26045 913 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 HNRNPH3P31942 346 aaKnown RBP16.03■□□□□ 0.16
LIG1-205ENST00000593425 CD97P48960 835 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 CTSCP53634 463 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 PMS2P54278 862 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 DYNLT1P63172 113 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 TPM4P67936 248 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 GTF2H3Q13889 308 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 KCNAB1Q14722 419 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 ASTE1Q2TB18 679 aaPredicted RBP16.03■□□□□ 0.16
LIG1-205ENST00000593425 TEX44Q53QW1 395 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 CERS6Q6ZMG9 384 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 ASB18Q6ZVZ8 466 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 VSIG1Q86XK7 387 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 RFX6Q8HWS3 928 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 TTC30BQ8N4P2 665 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 FAM26EQ8N5C1 309 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 GDAP1Q8TB36 358 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 TRIM55Q9BYV6 548 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 TWSG1Q9GZX9 223 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 AKIRIN1Q9H9L7 192 aaPredicted RBP16.03■□□□□ 0.16
LIG1-205ENST00000593425 SEMA5BQ9P283 1151 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 PADI1Q9ULC6 663 aa16.03■□□□□ 0.16
LIG1-205ENST00000593425 PIPSLA2A3N6 862 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 CCNYL3P0C7X3 344 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 VCLP18206 1134 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 FECHP22830 423 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 CD68P34810 354 aaPredicted RBP16.02■□□□□ 0.16
LIG1-205ENST00000593425 HMGCLP35914 325 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 HALP42357 657 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 RPS18P62269 152 aaKnown RBP16.02■□□□□ 0.16
LIG1-205ENST00000593425 TUBB3Q13509 450 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 CCDC70Q6NSX1 233 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 PWWP2BQ6NUJ5 590 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 KDELC1Q6UW63 502 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 FAM83HQ6ZRV2 1179 aaPredicted RBP16.02■□□□□ 0.16
LIG1-205ENST00000593425 RASGEF1AQ8N9B8 481 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 TEX19Q8NA77 164 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 SIDT2Q8NBJ9 832 aaKnown RBP16.02■□□□□ 0.16
LIG1-205ENST00000593425 SLC35G2Q8TBE7 412 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 RNF25Q96BH1 459 aaPredicted RBP16.02■□□□□ 0.16
LIG1-205ENST00000593425 SLC41A2Q96JW4 573 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 TEKT5Q96M29 485 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 MAP3K3Q99759 626 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 MAK16Q9BXY0 300 aaKnown RBP16.02■□□□□ 0.16
LIG1-205ENST00000593425 ACTL8Q9H568 366 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 IL26Q9NPH9 171 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 RARRES3Q9UL19 164 aa16.02■□□□□ 0.16
LIG1-205ENST00000593425 PSMD13Q9UNM6 376 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms