RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 D6RAR5 112 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 LIASO43766 372 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 METTL18O95568 372 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ASMTLO95671 621 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ECEL1O95672 775 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 PTMAP06454 111 aaKnown RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF8P17098 575 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 CA5AP35218 305 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 TNNT3P45378 269 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 MAZP56270 477 aaKnown RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 PRPSAP1Q14558 356 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 NR1D2Q14995 579 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 PARP6Q2NL67 630 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ATP13A5Q4VNC0 1218 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ARSJQ5FYB0 599 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF648Q5T619 568 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ZDHHC20Q5W0Z9 365 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 RBM44Q6ZP01 1051 aaKnown RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 SPRED1Q7Z699 444 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 PHYKPLQ8IUZ5 450 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ARL14Q8N4G2 192 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 TRIM58Q8NG06 486 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 PATE1Q8WXA2 126 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 GRAMD1AQ96CP6 724 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ALS2CR12Q96Q35 445 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 UCN2Q96RP3 112 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 APOL2Q9BQE5 337 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 OR2AG1Q9H205 316 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ARFGAP3Q9NP61 516 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 GDF2Q9UK05 429 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-211ENST00000590499 PRKAB1Q9Y478 270 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 ENTPD2Q9Y5L3 495 aa11.07□□□□□ -0.64
SMAD4-211ENST00000590499 A0A1W2PNR3 127 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 GOLGA6L3A6NEY3 463 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 GPR39O43194 453 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 GRID2O43424 1007 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 BUD23O43709 281 aaKnown RBP11.06□□□□□ -0.64
SMAD4-211ENST00000590499 USP12O75317 370 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 PPFIA2O75334 1257 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 MTX2O75431 263 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 SLC25A14O95258 325 aaPredicted RBP11.06□□□□□ -0.64
SMAD4-211ENST00000590499 EML2O95834 649 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 RPLP0P05388 317 aaKnown RBP11.06□□□□□ -0.64
SMAD4-211ENST00000590499 BMP4P12644 408 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 ACP5P13686 325 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 SPAM1P38567 509 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 CLCNKAP51800 687 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF140P52738 457 aaPredicted RBP11.06□□□□□ -0.64
SMAD4-211ENST00000590499 CCL7P80098 99 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 B4GALNT1Q00973 533 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 PEX6Q13608 980 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 SPIDRQ14159 915 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 SPARCL1Q14515 664 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 PTPRCAPQ14761 206 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 TAF1AQ15573 450 aaPredicted RBP11.06□□□□□ -0.64
SMAD4-211ENST00000590499 CHRNA6Q15825 494 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 P3H1Q32P28 736 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 ARHGEF18Q6ZSZ5 1173 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 CCNJLQ8IV13 435 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF547Q8IVP9 402 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 C19orf43Q9BQ61 176 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 TBL1YQ9BQ87 522 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 LRRN3Q9H3W5 708 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 SMOXQ9NWM0 555 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 ZDHHC3Q9NYG2 299 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMAD4-211ENST00000590499 SCHIP1Q9P0W5 487 aaPredicted RBP11.06□□□□□ -0.64
SMAD4-211ENST00000590499 LRIT1Q9P2V4 623 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 ZNHIT2Q9UHR6 403 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 FEZ2Q9UHY8 353 aaPredicted RBP11.06□□□□□ -0.64
SMAD4-211ENST00000590499 KCTD3Q9Y597 815 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 ARL5AQ9Y689 179 aa11.06□□□□□ -0.64
SMAD4-211ENST00000590499 PIKFYVEQ9Y2I7 2098 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 GLYATL1P3A0A0U1RQE8 302 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 STX7O15400 261 aaKnown RBP11.05□□□□□ -0.64
SMAD4-211ENST00000590499 NRDCO43847 1150 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 VEGFDO43915 354 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 BRINP1O60477 761 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 AP2A1O95782 977 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 LPOP22079 712 aaPredicted RBP11.05□□□□□ -0.64
SMAD4-211ENST00000590499 STIP1P31948 543 aaKnown RBP11.05□□□□□ -0.64
SMAD4-211ENST00000590499 FASLGP48023 281 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 DRICH1Q6PGQ1 229 aaPredicted RBP11.05□□□□□ -0.64
SMAD4-211ENST00000590499 FAM151BQ6UXP7 276 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 CHST15Q7LFX5 561 aaPredicted RBP11.05□□□□□ -0.64
SMAD4-211ENST00000590499 C11orf96Q7Z7L8 435 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 B3GNT8Q7Z7M8 397 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 SFRP1Q8N474 314 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 DDHD1Q8NEL9 900 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 BRSK1Q8TDC3 778 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 C1orf54Q8WWF1 131 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 ATXN7L3BQ96GX2 97 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 KCNF1Q9H3M0 494 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 TBC1D29Q9UFV1 150 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 SLC23A2Q9UGH3 650 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 KCNK6Q9Y257 313 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 RAXQ9Y2V3 346 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 PKP3Q9Y446 797 aa11.05□□□□□ -0.64
SMAD4-211ENST00000590499 PMS2P1A4D2B8 440 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 C2orf81A6NN90 581 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms