RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 GLYATL1P3A0A0U1RQE8 302 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 C1QTNF9BB2RNN3 333 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 GPR89AB7ZAQ6 455 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 E7EVH7 732 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 CPNE3O75131 537 aaKnown RBP10.25□□□□□ -0.77
SDF2-208ENST00000589788 MT-CO3P00414 261 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 C1QTNF9P0C862 333 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 GPR89BP0CG08 455 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 AK4P27144 223 aaPredicted RBP10.25□□□□□ -0.77
SDF2-208ENST00000589788 CLDN6P56747 220 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 TARDBPQ13148 414 aaKnown RBP eCLIP10.25□□□□□ -0.77
SDF2-208ENST00000589788 ITGA9Q13797 1035 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 TUBB2AQ13885 445 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 C14orf28Q4W4Y0 310 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 PERM1Q5SV97 790 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 OGFOD3Q6PK18 319 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 FAM151BQ6UXP7 276 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 CHST15Q7LFX5 561 aaPredicted RBP10.25□□□□□ -0.77
SDF2-208ENST00000589788 GSTA5Q7RTV2 222 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 LINC00523Q86TU6 105 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 MARCH9Q86YJ5 346 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 GPR156Q8NFN8 814 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 OR4K2Q8NGD2 314 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 BRSK1Q8TDC3 778 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 CCDC74AQ96AQ1 378 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 PBKQ96KB5 322 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 DEPDC7Q96QD5 511 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 VPS35Q96QK1 796 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 CCDC3Q9BQI4 270 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 TUBB2BQ9BVA1 445 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 SYNDIG1Q9H7V2 258 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 TRIM39Q9HCM9 518 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 IL26Q9NPH9 171 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 RRAGDQ9NQL2 400 aaPredicted RBP10.25□□□□□ -0.77
SDF2-208ENST00000589788 HOMER3Q9NSC5 361 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 SPATS2LQ9NUQ6 558 aaKnown RBP10.25□□□□□ -0.77
SDF2-208ENST00000589788 ATXN10Q9UBB4 475 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 PRKAB1Q9Y478 270 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 ASXL3Q9C0F0 2248 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 CHD8Q9HCK8 2581 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 RP1P56715 2156 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 TMEM8BA6NDV4 472 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 ERI2A8K979 691 aaKnown RBP10.24□□□□□ -0.77
SDF2-208ENST00000589788 GRID2O43424 1007 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 NUAK1O60285 661 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 NOBOXO60393 691 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 DNAJC6O75061 913 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 AP2A1O95782 977 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 GAS8O95995 478 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 PROS1P07225 676 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 ACP5P13686 325 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 GLB1P16278 677 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 ZNF8P17098 575 aaPredicted RBP10.24□□□□□ -0.77
SDF2-208ENST00000589788 FDFT1P37268 417 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 GTF2H3Q13889 308 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 SEPT6Q14141 434 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 PTPRCAPQ14761 206 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 SIX1Q15475 284 aaPredicted RBP10.24□□□□□ -0.77
SDF2-208ENST00000589788 CHRNA6Q15825 494 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 ATP13A5Q4VNC0 1218 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 CERCAMQ5T4B2 595 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 ZNF648Q5T619 568 aaPredicted RBP10.24□□□□□ -0.77
SDF2-208ENST00000589788 KCTD11Q693B1 232 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 DENND5AQ6IQ26 1287 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 DRICH1Q6PGQ1 229 aaPredicted RBP10.24□□□□□ -0.77
SDF2-208ENST00000589788 CRTC3Q6UUV7 619 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 ADGRG6Q86SQ4 1221 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 NRROSQ86YC3 692 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 KLHDC8BQ8IXV7 354 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 WDR48Q8TAF3 677 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 DTX3LQ8TDB6 740 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 TTC25Q96NG3 672 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 GSX2Q9BZM3 304 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 ARNT2Q9HBZ2 717 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 PAK5Q9P286 719 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 APPL1Q9UKG1 709 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 DRG1Q9Y295 367 aaKnown RBP10.24□□□□□ -0.77
SDF2-208ENST00000589788 PLEKHM1Q9Y4G2 1056 aa10.24□□□□□ -0.77
SDF2-208ENST00000589788 TRABD2BA6NFA1 517 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 RHPN2P1A8MT19 583 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 KMOO15229 486 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 NUDT21O43809 227 aaKnown RBP10.23□□□□□ -0.77
SDF2-208ENST00000589788 VEGFDO43915 354 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A9O60656 530 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 MTX2O75431 263 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 URI1O94763 535 aaPredicted RBP10.23□□□□□ -0.77
SDF2-208ENST00000589788 CDK14O94921 469 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 PRAMEF1O95521 474 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 ETS1P14921 441 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 TPH1P17752 444 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A6P19224 532 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A1P22309 533 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A4P22310 534 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A3P35503 534 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 UGT1A5P35504 534 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 HADHAP40939 763 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 MAZP56270 477 aaKnown RBP10.23□□□□□ -0.77
SDF2-208ENST00000589788 TMPRSS15P98073 1019 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 SPIDRQ14159 915 aa10.23□□□□□ -0.77
SDF2-208ENST00000589788 HLTFQ14527 1009 aaKnown RBP eCLIP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms