RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZNF449Q6P9G9 518 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 TMEM220Q6QAJ8 160 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 C3orf62Q6ZUJ4 267 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 TRAPPC5Q8IUR0 188 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 LMX1AQ8TE12 382 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 CERS2Q96G23 380 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 TRIM56Q9BRZ2 755 aaKnown RBP19.31■□□□□ 0.68
CIRBP-220ENST00000588917 DUSP23Q9BVJ7 150 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 TMEM168Q9H0V1 697 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 VPS37BQ9H9H4 285 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 PPANQ9NQ55 473 aaKnown RBP19.31■□□□□ 0.68
CIRBP-220ENST00000588917 INTS10Q9NVR2 710 aaKnown RBP19.31■□□□□ 0.68
CIRBP-220ENST00000588917 PNMA8BQ9ULN7 279 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-220ENST00000588917 NFU1Q9UMS0 254 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 KMT2BQ9UMN6 2715 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-220ENST00000588917 SCN8AQ9UQD0 1980 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 LMO7DNF2Z398 122 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 KRT37O76014 449 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 TUBBP07437 444 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 OR56A5P0C7T3 313 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 CA5AP35218 305 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 ILF2Q12905 390 aaKnown RBP19.3■□□□□ 0.68
CIRBP-220ENST00000588917 FASTKD3Q14CZ7 662 aaKnown RBP19.3■□□□□ 0.68
CIRBP-220ENST00000588917 TYSND1Q2T9J0 566 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 UAP1L1Q3KQV9 507 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 BCL7AQ4VC05 210 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 KHDC1Q4VXA5 237 aaKnown RBP19.3■□□□□ 0.68
CIRBP-220ENST00000588917 HSP90AA5PQ58FG0 334 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 KIAA0408Q6ZU52 694 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 CHST15Q7LFX5 561 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-220ENST00000588917 CILP2Q8IUL8 1156 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 ZNF548Q8NEK5 533 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-220ENST00000588917 OR2I1PQ8NGU4 316 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 GPBAR1Q8TDU6 330 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 SGF29Q96ES7 293 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 TIMM29Q9BSF4 260 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 TSSK1BQ9BXA7 367 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 CLPBQ9H078 707 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 NSMCE4AQ9NXX6 385 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 MOCS1Q9NZB8 636 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 PCDH15Q96QU1 1955 aa19.3■□□□□ 0.68
CIRBP-220ENST00000588917 ZNF106Q9H2Y7 1883 aaKnown RBP19.29■□□□□ 0.68
CIRBP-220ENST00000588917 C17orf113A0A1B0GUU1 675 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 GOLGA8KD6RF30 607 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 GOLGA8TH3BQL2 631 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 PRMT5O14744 637 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-220ENST00000588917 FLRT2O43155 660 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 ANXA6P08133 673 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 PRSS56P0CW18 603 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 TNFRSF8P28908 595 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 PHBP35232 272 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 GRK6P43250 576 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 CLCNKAP51800 687 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 ADARP55265 1226 aaKnown RBP19.29■□□□□ 0.68
CIRBP-220ENST00000588917 B4GALNT1Q00973 533 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 CTBSQ01459 385 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 ZNF470Q6ECI4 717 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 TAF8Q7Z7C8 310 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 AMZ2Q86W34 360 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 SLC25A45Q8N413 288 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 CDKL2Q92772 493 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 LINC00615Q96LM1 132 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-220ENST00000588917 LRRC61Q9BV99 259 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 TCEAL2Q9H3H9 227 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-220ENST00000588917 IARS2Q9NSE4 1012 aaKnown RBP19.29■□□□□ 0.68
CIRBP-220ENST00000588917 MARCH4Q9P2E8 410 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-220ENST00000588917 PCDHB1Q9Y5F3 818 aa19.29■□□□□ 0.68
CIRBP-220ENST00000588917 OR2AG2A6NM03 316 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 H3BMM5 538 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 SDC3O75056 442 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 POP7O75817 140 aaKnown RBP19.28■□□□□ 0.68
CIRBP-220ENST00000588917 FTH1P02794 183 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 ERVK-10P10266 1014 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 ECHS1P30084 290 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 IL9RQ01113 521 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 MGAT5Q09328 741 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 C1orf61Q13536 156 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 SEMA3AQ14563 771 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 ST3GAL2Q16842 350 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 INSCQ1MX18 579 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 N4BP2L1Q5TBK1 243 aaPredicted RBP19.28■□□□□ 0.68
CIRBP-220ENST00000588917 DET1Q7L5Y6 550 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 CNTN4Q8IWV2 1026 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 GLMNQ92990 594 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 C9orf72Q96LT7 481 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 WDR83Q9BRX9 315 aaKnown RBP19.28■□□□□ 0.68
CIRBP-220ENST00000588917 BOCQ9BWV1 1114 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 NLGN3Q9NZ94 848 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 FBXO5Q9UKT4 447 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 ANGPTL2Q9UKU9 493 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 COMMD10Q9Y6G5 202 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 BPTFQ12830 3046 aa19.28■□□□□ 0.68
CIRBP-220ENST00000588917 MYLKQ15746 1914 aa19.27■□□□□ 0.68
CIRBP-220ENST00000588917 PI4KAP42356 2102 aa19.27■□□□□ 0.68
CIRBP-220ENST00000588917 YY2O15391 372 aa19.27■□□□□ 0.68
CIRBP-220ENST00000588917 S1PR4O95977 384 aa19.27■□□□□ 0.68
CIRBP-220ENST00000588917 ESR1P03372 595 aa19.27■□□□□ 0.68
CIRBP-220ENST00000588917 RPS3P23396 243 aaKnown RBP eCLIP19.27■□□□□ 0.68
CIRBP-220ENST00000588917 SSTR1P30872 391 aa19.27■□□□□ 0.68
CIRBP-220ENST00000588917 PRLHRP49683 370 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms