RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 AGAP2Q99490 1192 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 CTRCQ99895 268 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 TIMM29Q9BSF4 260 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 ZCCHC2Q9C0B9 1178 aaKnown RBP13.18□□□□□ -0.3
TRAF4-214ENST00000580073 ZNF768Q9H5H4 540 aaKnown RBP13.18□□□□□ -0.3
TRAF4-214ENST00000580073 ZFYVE1Q9HBF4 777 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 TRIM39Q9HCM9 518 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 ANKMY1Q9P2S6 941 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 POLHQ9Y253 713 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 OAS3Q9Y6K5 1087 aaKnown RBP13.18□□□□□ -0.3
TRAF4-214ENST00000580073 RPS6KL1Q9Y6S9 549 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 HECTD1Q9ULT8 2610 aa13.18□□□□□ -0.3
TRAF4-214ENST00000580073 LOC101059948A0A1B0GTJ6 334 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 TCRBV7S2A1N4TA0A589 114 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 PDZK1P1A8MUH7 402 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 FADS2P1A8MWK0 482 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 APOL1O14791 398 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 PPP1R12AO14974 1030 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-214ENST00000580073 NKX2-8O15522 239 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 VEGFDO43915 354 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 CST8O60676 142 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 RASSF9O75901 435 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 C9P02748 559 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 CCNYL3P0C7X3 344 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 OAS2P29728 719 aaKnown RBP13.17□□□□□ -0.3
TRAF4-214ENST00000580073 DLSTP36957 453 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 CD86P42081 329 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 CAPZBP47756 277 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 UBE2IP63279 158 aaKnown RBP13.17□□□□□ -0.3
TRAF4-214ENST00000580073 IFI35P80217 286 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-214ENST00000580073 GTF2H3Q13889 308 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 UBAP2LQ14157 1087 aaKnown RBP13.17□□□□□ -0.3
TRAF4-214ENST00000580073 IHHQ14623 411 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 SLC14A2Q15849 920 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 SKIDA1Q1XH10 827 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 DEFB109BQ30KR1 87 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 ODF2Q5BJF6 829 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 CCDC70Q6NSX1 233 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 C6orf15Q6UXA7 325 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-214ENST00000580073 TMEM26Q6ZUK4 368 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 PRSS42Q7Z5A4 293 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 RASGRP3Q8IV61 690 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 TRAM1L1Q8N609 369 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 ARRDC2Q8TBH0 407 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 ZDHHC12Q96GR4 267 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 OLFM3Q96PB7 478 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 SPRY4Q9C004 299 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 OR2AG1Q9H205 316 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 KLC4Q9NSK0 619 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 SIDT1Q9NXL6 827 aaKnown RBP13.17□□□□□ -0.3
TRAF4-214ENST00000580073 CNOT6Q9ULM6 557 aaKnown RBP13.17□□□□□ -0.3
TRAF4-214ENST00000580073 PRKAB1Q9Y478 270 aa13.17□□□□□ -0.3
TRAF4-214ENST00000580073 A0A0U1RQS6 177 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 MIF4GDA9UHW6 222 aaKnown RBP13.16□□□□□ -0.3
TRAF4-214ENST00000580073 FANCGO15287 622 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 EML2O95834 649 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 PRLP01236 227 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 ZNF8P17098 575 aaPredicted RBP13.16□□□□□ -0.3
TRAF4-214ENST00000580073 PTPN7P35236 360 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 HALP42357 657 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 PPIDQ08752 370 aaKnown RBP13.16□□□□□ -0.3
TRAF4-214ENST00000580073 PTPRRQ15256 657 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 PPP2R5EQ16537 467 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 QPCTQ16769 361 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 ZDHHC20Q5W0Z9 365 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 C16orf46Q6P387 395 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 KLHL35Q6PF15 583 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 BBS12Q6ZW61 710 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 PPP1R3BQ86XI6 285 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 CCDC50Q8IVM0 306 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 GLYATL1Q969I3 302 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 HAUS1Q96CS2 278 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 RBM41Q96IZ5 413 aaKnown RBP13.16□□□□□ -0.3
TRAF4-214ENST00000580073 TGM7Q96PF1 710 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 FAM118BQ9BPY3 351 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 TBC1D10AQ9BXI6 508 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 OSBPL8Q9BZF1 889 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 MAGEE1Q9HCI5 957 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 APMAPQ9HDC9 416 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 ATXN10Q9UBB4 475 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAF4-214ENST00000580073 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
TRAF4-214ENST00000580073 C21orf140B9A014 251 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 CHUKO15111 745 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 ZSCAN12O43309 604 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 KCNJ13O60928 360 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 RFPL1O75677 317 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 RECKO95980 971 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 ZFXP17010 805 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-214ENST00000580073 COPS2P61201 443 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 SRSF1Q07955 248 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAF4-214ENST00000580073 GALNT3Q14435 633 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAF4-214ENST00000580073 ALS2CLQ60I27 953 aa13.15□□□□□ -0.3
TRAF4-214ENST00000580073 CRTC3Q6UUV7 619 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms