RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 RMI1Q9H9A7 625 aa14.57□□□□□ -0.08
USB1-214ENST00000568848 TRIM39Q9HCM9 518 aa14.57□□□□□ -0.08
USB1-214ENST00000568848 ANO10Q9NW15 660 aa14.57□□□□□ -0.08
USB1-214ENST00000568848 TMEM63CQ9P1W3 806 aa14.57□□□□□ -0.08
USB1-214ENST00000568848 FAM8A1Q9UBU6 413 aa14.57□□□□□ -0.08
USB1-214ENST00000568848 ERRFI1Q9UJM3 462 aaPredicted RBP14.57□□□□□ -0.08
USB1-214ENST00000568848 ANAPC7Q9UJX3 599 aa14.57□□□□□ -0.08
USB1-214ENST00000568848 PCDHGA6Q9Y5G7 932 aa14.57□□□□□ -0.08
USB1-214ENST00000568848 SCINQ9Y6U3 715 aa14.57□□□□□ -0.08
USB1-214ENST00000568848 GOLGA6L3A6NEY3 463 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 OR5K4A6NMS3 321 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 ANKRD66B4E2M5 251 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 CHUKO15111 745 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 ZNF185O15231 689 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 SLC2A4P14672 509 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 BPIP17213 487 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 PBLDP30039 288 aaPredicted RBP14.56□□□□□ -0.08
USB1-214ENST00000568848 ZNF135P52742 658 aaPredicted RBP14.56□□□□□ -0.08
USB1-214ENST00000568848 KLHL30Q0D2K2 578 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 IL11RAQ14626 422 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 PAFAH1B3Q15102 231 aaKnown RBP14.56□□□□□ -0.08
USB1-214ENST00000568848 STX1AQ16623 288 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
USB1-214ENST00000568848 CCDC122Q5T0U0 273 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 CCDC183Q5T5S1 534 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 LRRTM4Q86VH4 590 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 SIDT2Q8NBJ9 832 aaKnown RBP14.56□□□□□ -0.08
USB1-214ENST00000568848 FDCSPQ8NFU4 85 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 MR1Q95460 341 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 CXorf40BQ96DE9 158 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 TRIB3Q96RU7 358 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 NUP85Q9BW27 656 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 CHST8Q9H2A9 424 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 EPB41L1Q9H4G0 881 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 UCK1Q9HA47 277 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 ZFYVE1Q9HBF4 777 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 ACSS2Q9NR19 701 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 RARRES3Q9UL19 164 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 ZNF711Q9Y462 761 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 CROCCQ5TZA2 2017 aa14.56□□□□□ -0.08
USB1-214ENST00000568848 ANKRD17O75179 2603 aaKnown RBP14.55□□□□□ -0.08
USB1-214ENST00000568848 MDC1Q14676 2089 aaKnown RBP14.55□□□□□ -0.08
USB1-214ENST00000568848 MBD3O95983 291 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 PTPN4P29074 926 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 CTSCP53634 463 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 ITGA1P56199 1179 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 NR6A1Q15406 480 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 JMJD6Q6NYC1 403 aaPredicted RBP14.55□□□□□ -0.08
USB1-214ENST00000568848 NPNTQ6UXI9 565 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 TRAPPC5Q8IUR0 188 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 RBMXL3Q8N7X1 1067 aaKnown RBP14.55□□□□□ -0.08
USB1-214ENST00000568848 CCNYQ8ND76 341 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 ANKRD20A12PQ8NF67 263 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 SPATA22Q8NHS9 363 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 CCHCR1Q8TD31 782 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 TEKT4Q8WW24 435 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 ISCUQ9H1K1 167 aa14.55□□□□□ -0.08
USB1-214ENST00000568848 LRRC10BA6NIK2 292 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 KMOO15229 486 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 BUD23O43709 281 aaKnown RBP14.54□□□□□ -0.08
USB1-214ENST00000568848 CDK14O94921 469 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 CCDC172P0C7W6 258 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 GZMAP12544 262 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 CLCNKAP51800 687 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 IFI16Q16666 785 aaKnown RBP14.54□□□□□ -0.08
USB1-214ENST00000568848 ATP13A5Q4VNC0 1218 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 SLC6A19Q695T7 634 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 ABRAXAS1Q6UWZ7 409 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 SRRM1Q8IYB3 904 aaKnown RBP14.54□□□□□ -0.08
USB1-214ENST00000568848 TRAM1L1Q8N609 369 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 BEND7Q8N7W2 519 aaPredicted RBP14.54□□□□□ -0.08
USB1-214ENST00000568848 ENDOVQ8N8Q3 282 aaKnown RBP14.54□□□□□ -0.08
USB1-214ENST00000568848 SLC41A2Q96JW4 573 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 NAP1L5Q96NT1 182 aaPredicted RBP14.54□□□□□ -0.08
USB1-214ENST00000568848 AGAP3Q96P47 875 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 MLXIPLQ9NP71 852 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
USB1-214ENST00000568848 FGF21Q9NSA1 209 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 POT1Q9NUX5 634 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 UBP1Q9NZI7 540 aa14.54□□□□□ -0.08
USB1-214ENST00000568848 PIKFYVEQ9Y2I7 2098 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 CCDC88CQ9P219 2028 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 C21orf140B9A014 251 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 UGT1A9O60656 530 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 SCRG1O75711 98 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 MT-CYBP00156 380 aaPredicted RBP14.53□□□□□ -0.08
USB1-214ENST00000568848 UGT1A6P19224 532 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 UGT1A1P22309 533 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 UGT1A4P22310 534 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 CCNCP24863 283 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 PRKCIP41743 596 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 TYRO3Q06418 890 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 ABRQ12979 859 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 PIGHQ14442 188 aaPredicted RBP14.53□□□□□ -0.08
USB1-214ENST00000568848 NFE2L1Q14494 772 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 PTPRCAPQ14761 206 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 PLCL1Q15111 1095 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 RPE65Q16518 533 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 PTCHD3Q3KNS1 767 aa14.53□□□□□ -0.08
USB1-214ENST00000568848 DNTTIP2Q5QJE6 756 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms