RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 GPR89BP0CG08 455 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 IDSP22304 550 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 KLRB1Q12918 225 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 DNASE1L3Q13609 305 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 ATP13A5Q4VNC0 1218 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 PDPK2PQ6A1A2 396 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 SLC9A4Q6AI14 798 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 CLEC18BQ6UXF7 455 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 CERS6Q6ZMG9 384 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 H2AFVQ71UI9 128 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 PRSS42Q7Z5A4 293 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 C11orf96Q7Z7L8 435 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 CLEC18CQ8NCF0 446 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 GDAP1Q8TB36 358 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 CT55Q8WUE5 264 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 OLFM3Q96PB7 478 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 TWSG1Q9GZX9 223 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 SLC25A51Q9H1U9 297 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 POLHQ9Y253 713 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 ICE1Q9Y2F5 2266 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 PRRC2CQ9Y520 2896 aaKnown RBP15.24■□□□□ 0.03
NME3-211ENST00000568561 SYCE3A1L190 88 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 PIPSLA2A3N6 862 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 MKRN2OSH3BPM6 223 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 TOX3O15405 576 aaPredicted RBP15.23■□□□□ 0.03
NME3-211ENST00000568561 VEGFDO43915 354 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 PDGFAP04085 211 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 FGF5P12034 268 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 TNNT1P13805 278 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 CA5AP35218 305 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 IL11RAQ14626 422 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 ABRAXAS1Q6UWZ7 409 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 PPP1R3BQ86XI6 285 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 RFX6Q8HWS3 928 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 KLHL6Q8WZ60 621 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 MIB2Q96AX9 1013 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 RNF25Q96BH1 459 aaPredicted RBP15.23■□□□□ 0.03
NME3-211ENST00000568561 TADA1Q96BN2 335 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 GLOD4Q9HC38 313 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 RAD18Q9NS91 495 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 IFNKQ9P0W0 207 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 TLK1Q9UKI8 766 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 PSMD13Q9UNM6 376 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 MAN2B2Q9Y2E5 1009 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 MED13Q9UHV7 2174 aa15.23■□□□□ 0.03
NME3-211ENST00000568561 IGHV5-51A0A0C4DH38 117 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 RFPL1O75677 317 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 NDST3O95803 873 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 NELFEP18615 380 aaKnown RBP15.22■□□□□ 0.03
NME3-211ENST00000568561 CHRNA4P43681 627 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 CTSCP53634 463 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 RPS18P62269 152 aaKnown RBP15.22■□□□□ 0.03
NME3-211ENST00000568561 TPM4P67936 248 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 TMEM115Q12893 351 aaPredicted RBP15.22■□□□□ 0.03
NME3-211ENST00000568561 TUBB3Q13509 450 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 PDK1Q15118 436 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 LLGL1Q15334 1064 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 SLC18A3Q16572 532 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.22■□□□□ 0.03
NME3-211ENST00000568561 AGAP9Q5VTM2 703 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 PWWP2BQ6NUJ5 590 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 FAM199XQ6PEV8 388 aaPredicted RBP15.22■□□□□ 0.03
NME3-211ENST00000568561 FAM83HQ6ZRV2 1179 aaPredicted RBP15.22■□□□□ 0.03
NME3-211ENST00000568561 ASB18Q6ZVZ8 466 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 TEX19Q8NA77 164 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 NAT14Q8WUY8 206 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 ZDHHC12Q96GR4 267 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 TRIM55Q9BYV6 548 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 AKIRIN1Q9H9L7 192 aaPredicted RBP15.22■□□□□ 0.03
NME3-211ENST00000568561 SAE1Q9UBE0 346 aaPredicted RBP15.22■□□□□ 0.03
NME3-211ENST00000568561 HYOU1Q9Y4L1 999 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 SPTBP11277 2137 aa15.22■□□□□ 0.03
NME3-211ENST00000568561 UNC79Q9P2D8 2635 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 NOTCH2Q04721 2471 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 A0A0A6YYK5 440 aaPredicted RBP15.21■□□□□ 0.03
NME3-211ENST00000568561 PPP1R12AO14974 1030 aaPredicted RBP15.21■□□□□ 0.03
NME3-211ENST00000568561 BUD23O43709 281 aaKnown RBP15.21■□□□□ 0.03
NME3-211ENST00000568561 CREG1O75629 220 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 TMEM253P0C7T8 217 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 CCNYL3P0C7X3 344 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 EBLN1P0CF75 366 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 GP1BBP13224 206 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 FOLR1P15328 257 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 PTPN3P26045 913 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 PBLDP30039 288 aaPredicted RBP15.21■□□□□ 0.03
NME3-211ENST00000568561 HALP42357 657 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 UQCRFS1P47985 274 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 PMS2P54278 862 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 CHAF1BQ13112 559 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 GTF2H3Q13889 308 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 CPZQ66K79 652 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 CCDC70Q6NSX1 233 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 TCTN3Q6NUS6 607 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 DUS1LQ6P1R4 473 aaKnown RBP15.21■□□□□ 0.03
NME3-211ENST00000568561 FAM151BQ6UXP7 276 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 WASH2PQ6VEQ5 465 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 TTC30BQ8N4P2 665 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 FAM26EQ8N5C1 309 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 SLC25A41Q8N5S1 370 aa15.21■□□□□ 0.03
NME3-211ENST00000568561 SIDT2Q8NBJ9 832 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms