RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ACTL8Q9H568 366 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 LCMT1Q9UIC8 334 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 RARRES3Q9UL19 164 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 VPS4AQ9UN37 437 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 MTX2O75431 263 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 TIAF1O95411 115 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 MBD3O95983 291 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 PDGFAP04085 211 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 PIRTP0C851 137 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 BPIP17213 487 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 DRG2P55039 364 aaKnown RBP18.32■□□□□ 0.52
NME3-204ENST00000563498 TAS2R40P59535 323 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 CDK18Q07002 472 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 TUBB3Q13509 450 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 CAPRIN2Q6IMN6 1127 aaKnown RBP18.32■□□□□ 0.52
NME3-204ENST00000563498 KLHL35Q6PF15 583 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 NT5DC3Q86UY8 548 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 EFCAB3Q8N7B9 438 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 TADA1Q96BN2 335 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 RNF157Q96PX1 679 aa18.32■□□□□ 0.52
NME3-204ENST00000563498 TTLL8A6PVC2 850 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 ZNF487B1APH4 448 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 GOLGA6L22H0YM25 854 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 FECHP22830 423 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 HALP42357 657 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 ACY1Q03154 408 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 UGT8Q16880 541 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 KHDC1Q4VXA5 237 aaKnown RBP18.31■□□□□ 0.52
NME3-204ENST00000563498 FHL5Q5TD97 284 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 PWWP2BQ6NUJ5 590 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 KMT5CQ86Y97 462 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 CPNE8Q86YQ8 564 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 SIDT2Q8NBJ9 832 aaKnown RBP18.31■□□□□ 0.52
NME3-204ENST00000563498 BRSK1Q8TDC3 778 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 TRIM55Q9BYV6 548 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 SLC25A51Q9H1U9 297 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 UVRAGQ9P2Y5 699 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 WDR37Q9Y2I8 494 aa18.31■□□□□ 0.52
NME3-204ENST00000563498 PCDHGA9Q9Y5G4 932 aaKnown RBP18.31■□□□□ 0.52
NME3-204ENST00000563498 SPTBN1Q01082 2364 aaKnown RBP18.31■□□□□ 0.52
NME3-204ENST00000563498 IGHV5-51A0A0C4DH38 117 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 DNAJB5O75953 348 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 SERPINC1P01008 464 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 SLC4A1P02730 911 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 FOLR1P15328 257 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 KDELR1P24390 212 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 PTPN4P29074 926 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 UQCRFS1P47985 274 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 ZBED6P86452 979 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 DMPKQ09013 629 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 TMEM115Q12893 351 aaPredicted RBP18.3■□□□□ 0.52
NME3-204ENST00000563498 GTF2H3Q13889 308 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 NFKBIBQ15653 356 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 SYVN1Q86TM6 617 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 VSIG1Q86XK7 387 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 TRAPPC5Q8IUR0 188 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 PLD5Q8N7P1 536 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 CPT1CQ8TCG5 803 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 DTX3LQ8TDB6 740 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 CD180Q99467 661 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 CBX8Q9HC52 389 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 MLXIPLQ9NP71 852 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 CTTNBP2NLQ9P2B4 639 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 TMPRSS11EQ9UL52 423 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 NENFQ9UMX5 172 aa18.3■□□□□ 0.52
NME3-204ENST00000563498 UNC79Q9P2D8 2635 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 AGFG2O95081 481 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 NDST3O95803 873 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 GNLYP22749 145 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 HMGCLP35914 325 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 PGDP52209 483 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 PPP1CAP62136 330 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 AP1B1Q10567 949 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 LAMB3Q13751 1172 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 PCSK7Q16549 785 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 ATP13A5Q4VNC0 1218 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 PAPD7Q5XG87 772 aaKnown RBP18.29■□□□□ 0.52
NME3-204ENST00000563498 SLC9A4Q6AI14 798 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 CCDC70Q6NSX1 233 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 RAPGEF5Q92565 580 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 IQCDQ96DY2 449 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 ZNF514Q96K75 400 aaPredicted RBP18.29■□□□□ 0.52
NME3-204ENST00000563498 AGAP3Q96P47 875 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 SLC25A23Q9BV35 468 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 TRIM10Q9UDY6 481 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 PLEKHB1Q9UF11 243 aaPredicted RBP18.29■□□□□ 0.52
NME3-204ENST00000563498 HEY1Q9Y5J3 304 aa18.29■□□□□ 0.52
NME3-204ENST00000563498 PBX1P40424 430 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 RPS15P62841 145 aaKnown RBP18.28■□□□□ 0.52
NME3-204ENST00000563498 PDE1BQ01064 536 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 KCNAB1Q14722 419 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 PDK1Q15118 436 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 ZFYVE27Q5T4F4 411 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 ZDHHC20Q5W0Z9 365 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 ZNF517Q6ZMY9 492 aaPredicted RBP18.28■□□□□ 0.52
NME3-204ENST00000563498 AMZ2Q86W34 360 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 TTC25Q96NG3 672 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 OLFM3Q96PB7 478 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 RUFY1Q96T51 708 aa18.28■□□□□ 0.52
NME3-204ENST00000563498 CEP41Q9BYV8 373 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms