RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 KCTD3Q9Y597 815 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 GOLGA6L3A6NEY3 463 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 PMPCBO75439 489 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 SPAG6O75602 509 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 RASSF9O75901 435 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 NDST3O95803 873 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 TMEM253P0C7T8 217 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 TMEM115Q12893 351 aaPredicted RBP16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 IL11RAQ14626 422 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 SLC14A2Q15849 920 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 CACHD1Q5VU97 1274 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 VSIG1Q86XK7 387 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 RASGRP3Q8IV61 690 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 SLC35G2Q8TBE7 412 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 VPS35Q96QK1 796 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 EPHA6Q9UF33 1036 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 LCMT1Q9UIC8 334 aa16.49■□□□□ 0.23
HDGFL3-203ENST00000563404 GPR39O43194 453 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 KATNA1O75449 491 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 NELFEP18615 380 aaKnown RBP16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 IDSP22304 550 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 PTPN3P26045 913 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 CD68P34810 354 aaPredicted RBP16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 DYNLT1P63172 113 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 TPM4P67936 248 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 SEPT6Q14141 434 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 TEX44Q53QW1 395 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 IRGCQ6NXR0 463 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 TTC30BQ8N4P2 665 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 GPR150Q8NGU9 434 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 MIB2Q96AX9 1013 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 RNF25Q96BH1 459 aaPredicted RBP16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 CXorf40BQ96DE9 158 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 STAMBPL1Q96FJ0 436 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 TEKT5Q96M29 485 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 AKIRIN1Q9H9L7 192 aaPredicted RBP16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 IL26Q9NPH9 171 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 SEMA5BQ9P283 1151 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 LNPEPQ9UIQ6 1025 aa16.48■□□□□ 0.23
HDGFL3-203ENST00000563404 IGHV5-51A0A0C4DH38 117 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 PPP1R12AO14974 1030 aaPredicted RBP16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 MTSS1O43312 755 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 KRT1P04264 644 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 FOLR1P15328 257 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 CTSCP53634 463 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 KLRB1Q12918 225 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 KCNAB1Q14722 419 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 PRKD1Q15139 912 aaPredicted RBP16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 KDELC1Q6UW63 502 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 MFSD7Q6UXD7 560 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 CERS6Q6ZMG9 384 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 FAM83HQ6ZRV2 1179 aaPredicted RBP16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 RFX6Q8HWS3 928 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 TRAPPC5Q8IUR0 188 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 RBM12BQ8IXT5 1001 aaKnown RBP16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 CT55Q8WUE5 264 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 ZDHHC12Q96GR4 267 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 RUFY1Q96T51 708 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 MAK16Q9BXY0 300 aaKnown RBP16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 RAB33BQ9H082 229 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 SAE1Q9UBE0 346 aaPredicted RBP16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 POLHQ9Y253 713 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 HYOU1Q9Y4L1 999 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 PCDHB3Q9Y5E6 796 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 PCDHGA6Q9Y5G7 932 aa16.47■□□□□ 0.23
HDGFL3-203ENST00000563404 A0A0A6YYK5 440 aaPredicted RBP16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 LOC285095A0A1B0GVY8 99 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 CDC14CA4D256 554 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 UGT1A9O60656 530 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 PDGFAP04085 211 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 UGT1A6P19224 532 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 UGT1A1P22309 533 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 UGT1A4P22310 534 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 HMGCLP35914 325 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 CHRNA4P43681 627 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 WASHC5Q12768 1159 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 DNASE1L3Q13609 305 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 PWWP2BQ6NUJ5 590 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 TCTN3Q6NUS6 607 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 PPP1R3BQ86XI6 285 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 RASGEF1AQ8N9B8 481 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 GDAP1Q8TB36 358 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 SLC41A2Q96JW4 573 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 DNAJC7Q99615 494 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 XPO4Q9C0E2 1151 aaKnown RBP16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 UGT1A7Q9HAW7 530 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 UGT1A10Q9HAW8 530 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 UGT1A8Q9HAW9 530 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 LHX9Q9NQ69 397 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 TLK1Q9UKI8 766 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 PADI1Q9ULC6 663 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 MAN2B2Q9Y2E5 1009 aa16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 UTP20O75691 2785 aaKnown RBP16.46■□□□□ 0.23
HDGFL3-203ENST00000563404 USP9XQ93008 2570 aaPredicted RBP16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 SSU72P8A0A1W2PR75 194 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 MKRN2OSH3BPM6 223 aa16.45■□□□□ 0.22
HDGFL3-203ENST00000563404 GAPDHSO14556 408 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms