RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 NOP53Q9NZM5 478 aaKnown RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 ERVW-1Q9UQF0 538 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 MRPS17Q9Y2R5 130 aaKnown RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 MTF2Q9Y483 593 aaPredicted RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 TECTAO75443 2155 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 C1orf232A0A0U1RR37 186 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 KANSL1LA0AUZ9 987 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 SDHDO14521 159 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 ASLP04424 464 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 ITGALP20701 1170 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 SIGLEC14Q08ET2 396 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 CCINQ13939 588 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 MYLK3Q32MK0 819 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 SNX20Q7Z614 316 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 NET1Q7Z628 596 aaPredicted RBP17.59■□□□□ 0.41
SNX1-208ENST00000559844 SPNS2Q8IVW8 549 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 CBARPQ8N350 705 aaPredicted RBP17.59■□□□□ 0.41
SNX1-208ENST00000559844 POU5F2Q8N7G0 328 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 ENDOVQ8N8Q3 282 aaKnown RBP17.59■□□□□ 0.41
SNX1-208ENST00000559844 ACTRT2Q8TDY3 377 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 EDAQ92838 391 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 FAM136AQ96C01 138 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 EID2BQ96D98 161 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 LYSMD1Q96S90 227 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 THTPAQ9BU02 230 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 OSBPL1AQ9BXW6 950 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 CPEB1Q9BZB8 566 aaKnown RBP17.59■□□□□ 0.41
SNX1-208ENST00000559844 P2RY12Q9H244 342 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 ZNF385DQ9H6B1 395 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 DCLRE1BQ9H816 532 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 TBC1D17Q9HA65 648 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 MEAF6Q9HAF1 191 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 A0A1W2PQ67 120 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 RGSL1A5PLK6 1076 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 TMEM233B4DJY2 109 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 UBXN8O00124 270 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 STK25O00506 426 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 PRMT5O14744 637 aaPredicted RBP17.59■□□□□ 0.41
SNX1-208ENST00000559844 OR1I1O60431 355 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 GFAPP14136 432 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 ZNF7P17097 686 aaPredicted RBP17.59■□□□□ 0.41
SNX1-208ENST00000559844 CHRM3P20309 590 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 RPS3P23396 243 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNX1-208ENST00000559844 PIK3R1P27986 724 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 HNF1BP35680 557 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 INHBCP55103 352 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 IL2P60568 153 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 BTKQ06187 659 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 HERC3Q15034 1050 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 EGFLAMQ63HQ2 1017 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 ULK2Q8IYT8 1036 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 ZNF513Q8N8E2 541 aaPredicted RBP17.59■□□□□ 0.41
SNX1-208ENST00000559844 RP9Q8TA86 221 aaKnown RBP17.59■□□□□ 0.41
SNX1-208ENST00000559844 GRIN3AQ8TCU5 1115 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 FOXQ1Q9C009 403 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 LTB4R2Q9NPC1 389 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 SLCO3A1Q9UIG8 710 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 TRAF6Q9Y4K3 522 aa17.59■□□□□ 0.41
SNX1-208ENST00000559844 MEI4A8MW99 385 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 SUPT3HB4E1H0 165 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 NIPSNAP2O75323 286 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 SUPT3HO75486 399 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 PRAMEF1O95521 474 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 MTHFD2P13995 350 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 GM2AP17900 193 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 KIR2DL1P43626 348 aaPredicted RBP17.58■□□□□ 0.4
SNX1-208ENST00000559844 E2F5Q15329 346 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 CDKN3Q16667 212 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 PFKFB4Q16877 469 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 TRMT5Q32P41 509 aaKnown RBP17.58■□□□□ 0.4
SNX1-208ENST00000559844 C2orf27AQ580R0 203 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 FBXO39Q8N4B4 442 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 SIDT2Q8NBJ9 832 aaKnown RBP17.58■□□□□ 0.4
SNX1-208ENST00000559844 CD200R1Q8TD46 325 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 MRGPRX3Q96LB0 322 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 HCN2Q9UL51 889 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 L3MBTL1Q9Y468 752 aa17.58■□□□□ 0.4
SNX1-208ENST00000559844 STX16-NPEPL1H3BU86 382 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 STX16O14662 325 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 ENTPD5O75356 428 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 POP4O95707 220 aaKnown RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 JUNP05412 331 aaKnown RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 SRPRAP08240 638 aaKnown RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 GKP32189 559 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 TIE1P35590 1138 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 SPAM1P38567 509 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 NNMTP40261 264 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 ST8SIA6P61647 398 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 CUL3Q13618 768 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 ZNF234Q14588 700 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 KPNB1Q14974 876 aaKnown RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 FBXO43Q4G163 708 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 FNDC3BQ53EP0 1204 aaKnown RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 CARD16Q5EG05 197 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 FAM151BQ6UXP7 276 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 RBFAQ8N0V3 343 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 CLYBLQ8N0X4 340 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 CATSPER2Q96P56 530 aa17.57■□□□□ 0.4
SNX1-208ENST00000559844 LENG8Q96PV6 779 aaPredicted RBP17.57■□□□□ 0.4
SNX1-208ENST00000559844 CLPBQ9H078 707 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms