RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 COILP38432 576 aaPredicted RBP16.44■□□□□ 0.22
NEK9-211ENST00000557673 GPR1P46091 355 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 CCR10P46092 362 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 POLD2P49005 469 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 RAB15P59190 212 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 GPLD1P80108 840 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 SRSF1Q07955 248 aaKnown RBP eCLIP16.44■□□□□ 0.22
NEK9-211ENST00000557673 KCNAB2Q13303 367 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 DCAF12Q5T6F0 453 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 KCTD11Q693B1 232 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 CCDC137Q6PK04 289 aaKnown RBP16.44■□□□□ 0.22
NEK9-211ENST00000557673 DOK6Q6PKX4 331 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 SLC30A9Q6PML9 568 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 KDELC2Q7Z4H8 507 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 AGAP2Q99490 1192 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 FICDQ9BVA6 458 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 SLC39A1Q9NY26 324 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 RNF14Q9UBS8 474 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 SUFUQ9UMX1 484 aa16.44■□□□□ 0.22
NEK9-211ENST00000557673 AAR2Q9Y312 384 aaKnown RBP16.44■□□□□ 0.22
NEK9-211ENST00000557673 ARHGEF17Q96PE2 2063 aaPredicted RBP16.44■□□□□ 0.22
NEK9-211ENST00000557673 C1orf232A0A0U1RR37 186 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 ZNF891A8MT65 544 aaPredicted RBP16.43■□□□□ 0.22
NEK9-211ENST00000557673 B4E171 279 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 ANKRD66B4E2M5 251 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 KIF2AO00139 706 aaPredicted RBP16.43■□□□□ 0.22
NEK9-211ENST00000557673 EPOP01588 193 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 IVLP07476 585 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 ZSCAN5DPP0CG00 497 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 HLA-DPA1P20036 260 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 RPL22P35268 128 aaKnown RBP16.43■□□□□ 0.22
NEK9-211ENST00000557673 UGT1A3P35503 534 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 TSPAN7P41732 249 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 CHRNA4P43681 627 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 POLE2P56282 527 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 DPTQ07507 201 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 SEMA5AQ13591 1074 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 SLC1A5Q15758 541 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 SIRPB2Q5JXA9 342 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 ADAMTSL4Q6UY14 1074 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 GSTA5Q7RTV2 222 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 TRIM74Q86UV6 250 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 CACNA2D3Q8IZS8 1091 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 TAB3Q8N5C8 712 aaPredicted RBP16.43■□□□□ 0.22
NEK9-211ENST00000557673 ART4Q93070 314 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 TEFMQ96QE5 360 aaKnown RBP16.43■□□□□ 0.22
NEK9-211ENST00000557673 EFHD1Q9BUP0 239 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 RIOK2Q9BVS4 552 aaKnown RBP16.43■□□□□ 0.22
NEK9-211ENST00000557673 DDX47Q9H0S4 455 aaKnown RBP16.43■□□□□ 0.22
NEK9-211ENST00000557673 KCNK4Q9NYG8 393 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 SLC17A4Q9Y2C5 497 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 B3GALT1Q9Y5Z6 326 aa16.43■□□□□ 0.22
NEK9-211ENST00000557673 IGHV1OR21-1A0A087WYE8 117 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 AP2A1O95782 977 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 NTRK1P04629 796 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 AK4P27144 223 aaPredicted RBP16.42■□□□□ 0.22
NEK9-211ENST00000557673 FDFT1P37268 417 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 PAFAH1B1P43034 410 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 TNNT3P45378 269 aaPredicted RBP16.42■□□□□ 0.22
NEK9-211ENST00000557673 CTBSQ01459 385 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 OLIG2Q13516 323 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 TMEM71Q6P5X7 295 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 ZNF765Q7L2R6 523 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 KIAA1143Q96AT1 154 aaPredicted RBP16.42■□□□□ 0.22
NEK9-211ENST00000557673 AHCYL2Q96HN2 611 aaKnown RBP16.42■□□□□ 0.22
NEK9-211ENST00000557673 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 LRRC40Q9H9A6 602 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 RAB6BQ9NRW1 208 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 ANAPC2Q9UJX6 822 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 TMEM98Q9Y2Y6 226 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 ZNF711Q9Y462 761 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 BSNQ9UPA5 3926 aa16.42■□□□□ 0.22
NEK9-211ENST00000557673 COL12A1Q99715 3063 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 TUBB4AP04350 444 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 PIRTP0C851 137 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 THRAP10827 490 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 LIFP15018 202 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 ADCY8P40145 1251 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 ACTR1BP42025 376 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 ACTR1AP61163 376 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 KCTD19Q17RG1 926 aaPredicted RBP16.41■□□□□ 0.22
NEK9-211ENST00000557673 NKAIN2Q5VXU1 208 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 C4orf22Q6V702 233 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 RANBP10Q6VN20 620 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 LYSMD3Q7Z3D4 306 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 FAM129CQ86XR2 697 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 NRSN1Q8IZ57 195 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 NAGSQ8N159 534 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 SLC25A41Q8N5S1 370 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 GRK7Q8WTQ7 553 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 SLCO2A1Q92959 643 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 TBL1YQ9BQ87 522 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 APOL2Q9BQE5 337 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 ETNK1Q9HBU6 452 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 MAGEE1Q9HCI5 957 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 NEU2Q9Y3R4 380 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 SPO11Q9Y5K1 396 aa16.41■□□□□ 0.22
NEK9-211ENST00000557673 SDK2Q58EX2 2172 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 ERI2A8K979 691 aaKnown RBP16.4■□□□□ 0.22
NEK9-211ENST00000557673 CCDC188H7C350 402 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms