RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZFHX4Q86UP3 3567 aa13.45□□□□□ -0.26
SNX6-203ENST00000555416 ITPR1Q14643 2758 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 TRBV5-4A0A0C4DH59 114 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 TCRBV7S3A2A0A539 114 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 OR52A4PA6NMU1 304 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 ERI2A8K979 691 aaKnown RBP13.44□□□□□ -0.26
SNX6-203ENST00000555416 ZNF185O15231 689 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 DXOO77932 396 aaKnown RBP13.44□□□□□ -0.26
SNX6-203ENST00000555416 MSH3P20585 1137 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 AKT1P31749 480 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 CCKBRP32239 447 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 SLC19A1P41440 591 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 HHEXQ03014 270 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 GTF2H3Q13889 308 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 NFE2L1Q14494 772 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 CLCA4Q14CN2 919 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 C16orf72Q14CZ0 275 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 TRIP13Q15645 432 aaPredicted RBP13.44□□□□□ -0.26
SNX6-203ENST00000555416 TBC1D25Q3MII6 688 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 MAP9Q49MG5 647 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 FOXR1Q6PIV2 292 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 C19orf48Q6RUI8 117 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 LINC00523Q86TU6 105 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 NXPE1Q8N323 547 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 LILRA3Q8N6C8 439 aaPredicted RBP13.44□□□□□ -0.26
SNX6-203ENST00000555416 LIN37Q96GY3 246 aaPredicted RBP13.44□□□□□ -0.26
SNX6-203ENST00000555416 TTC25Q96NG3 672 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 OSBPL9Q96SU4 736 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 TBC1D10AQ9BXI6 508 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 SARS2Q9NP81 518 aaKnown RBP13.44□□□□□ -0.26
SNX6-203ENST00000555416 KCNK4Q9NYG8 393 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 CPNE7Q9UBL6 633 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 RALYQ9UKM9 306 aaKnown RBP13.44□□□□□ -0.26
SNX6-203ENST00000555416 ZKSCAN5Q9Y2L8 839 aa13.44□□□□□ -0.26
SNX6-203ENST00000555416 CCDC187A0A096LP49 1063 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 KIR2DS5A0A0G2JLQ3 304 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 A0A0G2JNG1 304 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 IGHV5-10-1A0A0J9YXX1 117 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 CCDC162PA2VCL2 907 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 PDZK1P1A8MUH7 402 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 E7EVH7 732 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 H7C0S8 307 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 KIR2DS3K7RE56 304 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 ZSCAN12O43309 604 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 CPNE6O95741 557 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 ITIH1P19827 911 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 ITPKBP27987 946 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 ACTN2P35609 894 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 HADHAP40939 763 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 ETV5P41161 510 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 LMAN1P49257 510 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 TERF1P54274 439 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 CRADDP78560 199 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 PDE1BQ01064 536 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 CDH17Q12864 832 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 BIRC2Q13490 618 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 KIR2DS5Q14953 304 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 ZRANB3Q5FWF4 1079 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 PHF19Q5T6S3 580 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 ABRAXAS1Q6UWZ7 409 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 PPP1R21Q6ZMI0 780 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 RAB11FIP2Q7L804 512 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 GSTA5Q7RTV2 222 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 SNX20Q7Z614 316 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 AMZ2Q86W34 360 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 SERPINA9Q86WD7 417 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 DNAAF3Q8N9W5 541 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 RCBTB1Q8NDN9 531 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 SNIP1Q8TAD8 396 aaKnown RBP13.43□□□□□ -0.26
SNX6-203ENST00000555416 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 MAIP1Q8WWC4 291 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 GRAMD1AQ96CP6 724 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 CRELD1Q96HD1 420 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 PBKQ96KB5 322 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 TMEM74Q96NL1 305 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 SLC46A1Q96NT5 459 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 DCBLD2Q96PD2 775 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 C19orf43Q9BQ61 176 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 OGFRQ9NZT2 677 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 FAM8A1Q9UBU6 413 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 CRLS1Q9UJA2 301 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 TTC7AQ9ULT0 858 aaPredicted RBP13.43□□□□□ -0.26
SNX6-203ENST00000555416 PSMD13Q9UNM6 376 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 SLC30A1Q9Y6M5 507 aa13.43□□□□□ -0.26
SNX6-203ENST00000555416 CHD6Q8TD26 2715 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 NBEAQ8NFP9 2946 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 IGLV3-16A0A075B6K0 115 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 CDRT15L2A8MXV6 281 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 PLD2O14939 933 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 FANCGO15287 622 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 TNFSF15O95150 251 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 XRCC1P18887 633 aaPredicted RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 ITGALP20701 1170 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 ACRV1P26436 265 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 FOXN2P32314 431 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 EIF2S3P41091 472 aaKnown RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 VPS41P49754 854 aa13.42□□□□□ -0.26
SNX6-203ENST00000555416 BASP1P80723 227 aaKnown RBP13.42□□□□□ -0.26
SNX6-203ENST00000555416 DMPKQ09013 629 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms