RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 GNPDA1P46926 289 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 GYS2P54840 703 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 IL9RQ01113 521 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 MGAT5Q09328 741 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 ILF3Q12906 894 aaKnown RBP eCLIP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 EIF2B5Q13144 721 aaKnown RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 PEX6Q13608 980 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 LRP8Q14114 963 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 MPP2Q14168 576 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 ELOCQ15369 112 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 KLHL38Q2WGJ6 581 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 FASTKD1Q53R41 847 aaKnown RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 ZNF542PQ5EBM4 170 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 PRAMEF14Q5SWL7 426 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 GPRC6AQ5T6X5 926 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 LYPLAL1Q5VWZ2 237 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 TAS2R42Q7RTR8 314 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 CROCCP2Q86T23 111 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 KRT222Q8N1A0 295 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 NXPE1Q8N323 547 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 OTUD6BQ8N6M0 293 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 PPM1NQ8N819 430 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 PNPLA1Q8N8W4 532 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 ZNF548Q8NEK5 533 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 GABPB2Q8TAK5 448 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 SCG3Q8WXD2 468 aaKnown RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 OR1E3Q8WZA6 343 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 TSACCQ96A04 125 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 ZNF669Q96BR6 464 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 MRRFQ96E11 262 aaKnown RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 CERS2Q96G23 380 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 CDKN2AIPNLQ96HQ2 116 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 OR2M4Q96R27 311 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 PAFAH2Q99487 392 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 COPS8Q99627 209 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 OR2AG1Q9H205 316 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 SUDS3Q9H7L9 328 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 IL21RQ9HBE5 538 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 TRIM39Q9HCM9 518 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 CYP4F12Q9HCS2 524 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 RXFP3Q9NSD7 469 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 TBK1Q9UHD2 729 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 DOLKQ9UPQ8 538 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 TMEM98Q9Y2Y6 226 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 BPTFQ12830 3046 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 CFAP54Q96N23 3096 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 CACNA1AO00555 2505 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 SCN8AQ9UQD0 1980 aa10.77□□□□□ -0.68
SHMT2-218ENST00000555213 CCDC162PA2VCL2 907 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 HMGB1P1B2RPK0 211 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 GAPDHSO14556 408 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 CDX4O14627 284 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 RGS16O15492 202 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 AQP9O43315 295 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 GDF9O60383 454 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 SDC3O75056 442 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 CDK14O94921 469 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 GOT2P00505 430 aaKnown RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 CEACAM5P06731 702 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 VCLP18206 1134 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 UGT1A6P19224 532 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 UGT1A1P22309 533 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 UGT1A4P22310 534 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 UGT1A3P35503 534 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 UGT1A5P35504 534 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 MSH2P43246 934 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 GRK6P43250 576 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 MAGOHP61326 146 aaKnown RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 XIAPP98170 497 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 HSP90AA5PQ58FG0 334 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 PRRT3Q5FWE3 981 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 KIAA0930Q6ICG6 404 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 MRNIPQ6NTE8 343 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 CERS6Q6ZMG9 384 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 MARK2Q7KZI7 788 aaKnown RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 TRABD2AQ86V40 505 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 SLC26A11Q86WA9 606 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 LRRC6Q86X45 466 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 GKN2Q86XP6 184 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 CNTN4Q8IWV2 1026 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 RBFAQ8N0V3 343 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 SDR16C5Q8N3Y7 309 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 OR4L1Q8NH43 312 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 LMX1AQ8TE12 382 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 SAP25Q8TEE9 199 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 HDAC10Q969S8 669 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF514Q96K75 400 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 RUFY1Q96T51 708 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 LRRC61Q9BV99 259 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 GSDMCQ9BYG8 508 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 PPCSQ9HAB8 311 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 CATSPERZQ9NTU4 200 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 EVA1BQ9NVM1 165 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 TRNAU1APQ9NX07 287 aaKnown RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF180Q9UJW8 692 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 CNOT6Q9ULM6 557 aaKnown RBP10.77□□□□□ -0.69
SHMT2-218ENST00000555213 SUFUQ9UMX1 484 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 CSNK1G3Q9Y6M4 447 aa10.77□□□□□ -0.69
SHMT2-218ENST00000555213 RALGAPA1Q6GYQ0 2036 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms