RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ELOA3DA6NLF2 546 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 IPO13O94829 963 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 BNIP3Q12983 259 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ELOA3BQ3SY89 546 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SCGB2B2Q4G0G5 96 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SLC9B1Q4ZJI4 515 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SBK1Q52WX2 424 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 LRRC73Q5JTD7 316 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PCID2Q5JVF3 399 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TXNDC11Q6PKC3 985 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 XKRXQ6PP77 449 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 AMIGO2Q86SJ2 522 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ELOA2Q8IYF1 753 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 COX18Q8N8Q8 333 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ELOA3Q8NG57 546 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 WDR77Q9BQA1 342 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PDP1Q9P0J1 537 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 A0A0A0MRY4 1105 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 DHFRP00374 187 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 IDSP22304 550 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CHKAP35790 457 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 C2orf80Q0P641 193 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ST3GAL4Q11206 333 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 DSG2Q14126 1118 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 C2orf76Q3KRA6 126 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ZFP69Q49AA0 526 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 RAB43Q86YS6 212 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ARL10Q8N8L6 244 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PROKR2Q8NFJ6 384 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PRMT6Q96LA8 375 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SPATA13Q96N96 652 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 B3GAT2Q9NPZ5 323 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 DNAJC5BQ9UF47 199 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 RSL24D1Q9UHA3 163 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TRPS1Q9UHF7 1281 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 NT5C1B-RDH14C9J2C7 533 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 AZIN1O14977 448 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 LSM1O15116 133 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ARFRP1Q13795 201 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CCDC80Q76M96 950 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CRYBG2Q8N1P7 616 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 NINJ1Q92982 152 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 UCK2Q9BZX2 261 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SEMA4AQ9H3S1 761 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 OAZ2O95190 189 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ITGA5P08648 1049 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF8P17098 575 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CD52P31358 61 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 FBXO25Q8TCJ0 367 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CLPTM1LQ96KA5 538 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SEMA6BQ9H3T3 888 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SP140LQ9H930 580 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 RAPGEFL1Q9UHV5 662 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 MRPS17Q9Y2R5 130 aaKnown RBP6.83□□□□□ -1.32
SYNE2-216ENST00000555002 HSPA12AO43301 675 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 AKAP3O75969 853 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 PSMG1O95456 288 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 MAP3K8P41279 467 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SEPHS1P49903 392 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 E2F2Q14209 437 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ODF4Q2M2E3 257 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SPDYCQ5MJ68 293 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 DHDDSQ86SQ9 333 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 RBFAQ8N0V3 343 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SFRP1Q8N474 314 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 MFSD2AQ8NA29 543 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 C7orf57Q8NEG2 295 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 OR8H1Q8NGG4 311 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 GPR151Q8TDV0 419 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 TBX5Q99593 518 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 FUT8Q9BYC5 575 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SEC61A2Q9H9S3 476 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 SNTG1Q9NSN8 517 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 ADAM28Q9UKQ2 775 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 CHD1O14646 1710 aa6.83□□□□□ -1.32
SYNE2-216ENST00000555002 F8VP50 259 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ENPP3O14638 875 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 MID1O15344 667 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 KAT7O95251 611 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 NR2F6P10588 404 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TGFB3P10600 412 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CFL1P23528 166 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CDK7P50613 346 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CDH13P55290 713 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 IFI35P80217 286 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CIR1Q86X95 450 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TSTD1Q8NFU3 115 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 WNT8BQ93098 351 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZYG11BQ9C0D3 744 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 DNAJC28Q9NX36 388 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF69Q9UC07 566 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 YARS2Q9Y2Z4 477 aaKnown RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 GLYATL1P3A0A0U1RQE8 302 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 GABBR2O75899 941 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 IFI30P13284 250 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 PTPRAP18433 802 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 GSTT1P30711 240 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 MAGEA11P43364 429 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms