RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 WDR59Q6PJI9 974 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 DOK6Q6PKX4 331 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 ASB18Q6ZVZ8 466 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 TECPR1Q7Z6L1 1165 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 TMEM135Q86UB9 458 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 TRIM74Q86UV6 250 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 TICAM1Q8IUC6 712 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 CREBRFQ8IUR6 639 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 TEX19Q8NA77 164 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 C3orf20Q8ND61 904 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 OR10G6Q8NH81 332 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 FNIP1Q8TF40 1166 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 PSKH2Q96QS6 385 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 MCCC1Q96RQ3 725 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-219ENST00000553488 PCDHB18PQ96TA0 734 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 CINPQ9BW66 212 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-219ENST00000553488 STK33Q9BYT3 514 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 WNT10AQ9GZT5 417 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 GANQ9H2C0 597 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 NDST4Q9H3R1 872 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 SARS2Q9NP81 518 aaKnown RBP7.21□□□□□ -1.26
ATXN3-219ENST00000553488 KCTD5Q9NXV2 234 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 ADGRE2Q9UHX3 823 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 CROTQ9UKG9 612 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 TLK1Q9UKI8 766 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 POLHQ9Y253 713 aa7.21□□□□□ -1.26
ATXN3-219ENST00000553488 SVILO95425 2214 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 CROCCQ5TZA2 2017 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 MDC1Q14676 2089 aaKnown RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PCSK5Q92824 1860 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 HIVEP1P15822 2718 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 A1L4Q6 167 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 GOLGA6L3A6NEY3 463 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 ARHGAP42A6NI28 874 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 POLR1CO15160 346 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 SOCS5O75159 536 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 VPS4BO75351 444 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PALMO75781 387 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 DNAJB5O75953 348 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PEX11BO96011 259 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 CPP00450 1065 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 DLSTP36957 453 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 ZNF143P52747 638 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 COPB1P53618 953 aaKnown RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 GFERP55789 205 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 JAM2P57087 298 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 RPL7AP62424 266 aaKnown RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 POLR2LP62875 67 aaKnown RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 OGDHQ02218 1023 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 HHEXQ03014 270 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 TRAF2Q12933 501 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 SLBPQ14493 270 aaKnown RBP eCLIP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 RFTN1Q14699 578 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PTPRRQ15256 657 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 CA9Q16790 459 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 VWA3BQ502W6 1294 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 RFLNAQ6ZTI6 216 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 Q6ZVL8 140 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 CYP4V2Q6ZWL3 525 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 CBLL1Q75N03 491 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 MON1BQ7L1V2 547 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 KDELC2Q7Z4H8 507 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 TSPAN33Q86UF1 283 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PHF13Q86YI8 300 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 APLFQ8IW19 511 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 TP53INP2Q8IXH6 220 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PGBD5Q8N414 524 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 KCT2Q8NC54 265 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PHC3Q8NDX5 983 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 CPT1CQ8TCG5 803 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 RNF31Q96EP0 1072 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 AHCYL2Q96HN2 611 aaKnown RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 COX14Q96I36 57 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 SLC38A3Q99624 504 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 TUBGCP2Q9BSJ2 902 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 SELENOOQ9BVL4 669 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 TRIM55Q9BYV6 548 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 GPATCH2LQ9NWQ4 482 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 RCOR3Q9P2K3 495 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-219ENST00000553488 VPS4AQ9UN37 437 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 TMEM98Q9Y2Y6 226 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PCDHGA6Q9Y5G7 932 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PCM1Q15154 2024 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 PIKFYVEQ9Y2I7 2098 aa7.2□□□□□ -1.26
ATXN3-219ENST00000553488 NF1P21359 2839 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 ZGRF1Q86YA3 2104 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 DNHD1Q96M86 4753 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 MTORP42345 2549 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 TRBV23OR9-2A0A075B6M9 112 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 A0A0U1RQS6 177 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-219ENST00000553488 A0A1W2PQ67 120 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 LILRA5A6NI73 299 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 SIGLEC16A6NMB1 481 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 EPHB6O15197 1021 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 DNAJC6O75061 913 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 GFPT2O94808 682 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 CLDN1O95832 211 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 C9P02748 559 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 DCTP40126 519 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms