RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 LMNAP02545 664 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 MYZAPP0CAP1 466 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 CTSEP14091 401 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 PKMP14618 531 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 H2AFXP16104 143 aaPredicted RBP9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 MPLP40238 635 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 NBL1P41271 181 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 CLCNKAP51800 687 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 LIMK2P53671 638 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 CLDN2P57739 230 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 NXPH1P58417 271 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 SRP54P61011 504 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 POU4F1Q01851 419 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 RPA4Q13156 261 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 SRSF5Q13243 272 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 ELOCQ15369 112 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 BEND6Q5SZJ8 279 aaPredicted RBP9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 RFLNAQ6ZTI6 216 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 HDXQ7Z353 690 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 ADGRG6Q86SQ4 1221 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 PIANPQ8IYJ0 282 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 DEFB119Q8N690 84 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 HM13Q8TCT9 377 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 LPGAT1Q92604 370 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 CABS1Q96KC9 395 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 OR2M4Q96R27 311 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 AGAP2Q99490 1192 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 RBBP8Q99708 897 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 TMEM109Q9BVC6 243 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 GSDMCQ9BYG8 508 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 OR2AG1Q9H205 316 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 VIPAS39Q9H9C1 493 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 EBF2Q9HAK2 575 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 PLAC1Q9HBJ0 212 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 SPATS2LQ9NUQ6 558 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 EVA1BQ9NVM1 165 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 SPASTQ9UBP0 616 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 ANKRD6Q9Y2G4 727 aa9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 ZFC3H1O60293 1989 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-206ENST00000549274 SDK1Q7Z5N4 2213 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CCDC189A1A4V9 331 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 NEMP2A6NFY4 417 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 DYNC1I1O14576 645 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 LIN7AO14910 233 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 KHNYNO15037 678 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 KDM1AO60341 852 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 S1PR4O95977 384 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 AHSGP02765 367 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CSF2P04141 144 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CFIP05156 583 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 APOA4P06727 396 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 SNRPAP09012 282 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CBSLP0DN79 551 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 ALPPL2P10696 532 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 ENO3P13929 434 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 NME1P15531 152 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CRABP2P29373 138 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CBSP35520 551 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 RXRGP48443 463 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 RGS4P49798 205 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 SERPINB8P50452 374 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 KPNA2P52292 529 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 HK3P52790 923 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 ATXN3P54252 364 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 DMPKQ09013 629 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 TCF15Q12870 199 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 ILF3Q12906 894 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CTBP1Q13363 440 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 NAA30Q147X3 362 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 INSCQ1MX18 579 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 SYTL3Q4VX76 610 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 PLEKHS1Q5SXH7 462 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 LVRNQ6Q4G3 990 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 TMEM220Q6QAJ8 160 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 ADGRD1Q6QNK2 874 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 LCA5Q86VQ0 697 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 AMZ2Q86W34 360 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 ZC3HC1Q86WB0 502 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 GKN2Q86XP6 184 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 DENND6AQ8IWF6 608 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 GOLGA6L1Q8N7Z2 621 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 PHC3Q8NDX5 983 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 PRSS33Q8NF86 280 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 ASZ1Q8WWH4 475 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 TSNARE1Q96NA8 513 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 PAFAH2Q99487 392 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 GPR22Q99680 433 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 TRIM56Q9BRZ2 755 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CCM2Q9BSQ5 444 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 AARSD1Q9BTE6 412 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 P2RY12Q9H244 342 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 FAM96AQ9H5X1 160 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 CARS2Q9HA77 564 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 SYTL2Q9HCH5 934 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 FBXO6Q9NRD1 293 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 LATS2Q9NRM7 1088 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 SENP1Q9P0U3 644 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 MARCH4Q9P2E8 410 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 ATXN10Q9UBB4 475 aa9.63□□□□□ -0.87
SMARCD1-206ENST00000549274 NCDNQ9UBB6 729 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms