RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 MLXIPQ9HAP2 919 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MAGEF1Q9HAY2 307 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 DDX4Q9NQI0 724 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TPSG1Q9NRR2 321 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 GKN1Q9NS71 199 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 NUDT15Q9NV35 164 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ABCD2Q9UBJ2 740 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MTRRQ9UBK8 725 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 NDRG3Q9UGV2 375 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 EBF1Q9UH73 591 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TRPS1Q9UHF7 1281 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 MGAT4BQ9UQ53 548 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 GAB2Q9UQC2 676 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 PLLPQ9Y342 182 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SNX24Q9Y343 169 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 TNPO3Q9Y5L0 923 aaKnown RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 SNX13Q9Y5W8 968 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 ST14Q9Y5Y6 855 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 BACE2Q9Y5Z0 518 aa4.31□□□□□ -1.72
SNHG1-219ENST00000542112 COL22A1Q8NFW1 1626 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-219ENST00000542112 RIC1Q4ADV7 1423 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PALLDQ8WX93 1383 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 IRS2Q9Y4H2 1338 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ROBO1Q9Y6N7 1651 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SHISA3A0PJX4 238 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MROH6A6NGR9 719 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 WDR64B1ANS9 1081 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 H0YIV9 168 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 J3QRK9 145 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FCHO1O14526 889 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 STX16O14662 325 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF263O14978 683 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ATP2A1O14983 1001 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SMAD6O43541 496 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 BRINP1O60477 761 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SYNCRIPO60506 623 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 HUS1O60921 280 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 IPO13O94829 963 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DDNO94850 711 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CELF2O95319 508 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 AGR2O95994 175 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FGGP02679 453 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ERBB2P04626 1255 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CEACAM5P06731 702 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PROS1P07225 676 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CD3EP07766 207 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SUPT20HL2P0C7V6 817 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 UBTFL1P0CB47 393 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CYP2D6P10635 497 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 RALBP11234 206 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 IL1R1P14778 569 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 IFNAR1P17181 557 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FSTP19883 344 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 TCN1P20061 433 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CYP2A7P20853 494 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MMP8P22894 467 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 WARSP23381 471 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MYF6P23409 242 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 IL1R2P27930 398 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CXCR5P32302 372 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ECI1P42126 302 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SLC1A4P43007 532 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CTSKP43235 329 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SLC15A1P46059 708 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CCR10P46092 362 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CAPZA2P47755 286 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PPM1FP49593 454 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MAN2A2P49641 1150 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 RGS19P49795 217 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 HLCSP50747 726 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 P2RY4P51582 365 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 GPR143P51810 404 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 NDST2P52849 883 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PRKAA2P54646 552 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PCBP3P57721 371 aaKnown RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 MGAT3Q09327 533 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CHAF1BQ13112 559 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FADDQ13158 208 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 STARD3Q14849 445 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PTPRRQ15256 657 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PSMD5Q16401 504 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CCNG2Q16589 344 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 HIST2H2ACQ16777 129 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-219ENST00000542112 NKPD1Q17RQ9 610 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DPY19L1Q2PZI1 675 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PGS1Q32NB8 556 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FAM83BQ5T0W9 1011 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SLC35F1Q5T1Q4 408 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PDSS1Q5T2R2 415 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 FAM171A1Q5VUB5 890 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 LPCAT4Q643R3 524 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 PM20D1Q6GTS8 502 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM65Q6PI78 240 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 CRTC3Q6UUV7 619 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 ZDHHC24Q6UX98 284 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 SPOCD1Q6ZMY3 1216 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 DPY19L3Q6ZPD9 716 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 USP49Q70CQ1 688 aa4.3□□□□□ -1.72
SNHG1-219ENST00000542112 RAB11FIP2Q7L804 512 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms