RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 A0A0X1KG70 313 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 CCDC154A6NI56 674 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 C12orf71A8MTZ7 269 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 SNX2O60749 519 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 YES1P07947 543 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 AGXTP21549 392 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 SLC6A2P23975 617 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 IL32P24001 234 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 GTF2E2P29084 291 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 ABCG1P45844 678 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 NKX3-2P78367 333 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 CD47Q08722 323 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 SLC10A6Q3KNW5 377 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 COLGALT1Q8NBJ5 622 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 ZNF555Q8NEP9 628 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 BPIFB1Q8TDL5 484 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 SDCCAG3Q96C92 435 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 SLC39A13Q96H72 371 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 VPS39Q96JC1 886 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 RIPOR3Q96MK2 946 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 SPATA13Q96N96 652 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 NARFLQ9H6Q4 476 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 GPATCH2LQ9NWQ4 482 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 SLC39A10Q9ULF5 831 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 STAP1Q9ULZ2 295 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 PTCH2Q9Y6C5 1203 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 CITO14578 2027 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 OR5K3A6NET4 321 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 ZNF487B1APH4 448 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 F5H423 210 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 CAPN1P07384 714 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 F7P08709 466 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 GPX3P22352 226 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 NR2C2P49116 596 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 MYL6P60660 151 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 GBE1Q04446 702 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 DUOXA2Q1HG44 320 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 PYCR3Q53H96 274 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 Q5BKY6 102 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 SYT6Q5T7P8 510 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 TSTD2Q5T7W7 516 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 FAM102AQ5T9C2 384 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 JADE1Q6IE81 842 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 BRSK1Q8TDC3 778 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 TTYH2Q9BSA4 534 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 MRM3Q9HC36 420 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 ABI2Q9NYB9 513 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 INTS6Q9UL03 887 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 PIN4Q9Y237 131 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 FIS1Q9Y3D6 152 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 GRIP1Q9Y3R0 1128 aa11.25□□□□□ -0.61
SEMA4D-221ENST00000537934 C2CD4BA6NLJ0 364 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 FXYD1O00168 92 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 UPK1AO00322 258 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 PRSS23O95084 383 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 MT-ND1P03886 318 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 GSTM1P09488 218 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CCDC159P0C7I6 412 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CD19P15391 556 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 PDGFRAP16234 1089 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CDC42EP1Q00587 391 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 RAD51Q06609 339 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 FOXM1Q08050 763 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 FAM205BPQ63HN1 556 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 RIMKLAQ8IXN7 391 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 KCTD4Q8WVF5 259 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 RXFP2Q8WXD0 754 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 ZNF669Q96BR6 464 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 ZHX1-C8orf76Q96EF9 292 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 DMRTB1Q96MA1 342 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CEP41Q9BYV8 373 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 ITM2CQ9NQX7 267 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 XPR1Q9UBH6 696 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 PCDHA9Q9Y5H5 950 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 A0A0J9YYE9 177 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 METTL15A6NJ78 407 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 USP12O75317 370 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 SEMA3DO95025 777 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 SNX4O95219 450 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CD4P01730 458 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 TCF3P15923 654 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 ALOX12P18054 663 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CYP2F1P24903 491 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CST5P28325 142 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 GRK4P32298 578 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CYP2C18P33260 490 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 GGT5P36269 586 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 NDST1P52848 882 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CRYBB1P53674 252 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 DNAJB13P59910 316 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 PRKCDQ05655 676 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 CAPRIN1Q14444 709 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 SMYD5Q6GMV2 418 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 TRNP1Q6NT89 227 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 NOXA1Q86UR1 476 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 FBXL6Q8N531 539 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 PARP16Q8N5Y8 322 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms