RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 AGAP9Q5VTM2 703 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 IRGCQ6NXR0 463 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 RFX6Q8HWS3 928 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 TRAPPC5Q8IUR0 188 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 SPATA22Q8NHS9 363 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 SLC35G2Q8TBE7 412 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 TTC25Q96NG3 672 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 OLFM3Q96PB7 478 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 VPS35Q96QK1 796 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 XPO4Q9C0E2 1151 aaKnown RBP16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 DEF6Q9H4E7 631 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 BPIFA1Q9NP55 256 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 EPHA6Q9UF33 1036 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 KCND3Q9UK17 655 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 TMPRSS11EQ9UL52 423 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 POLHQ9Y253 713 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 TP53TG5Q9Y2B4 290 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 SPO11Q9Y5K1 396 aa16.57■□□□□ 0.24
CAPRIN1-216ENST00000534042 FLNCQ14315 2725 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 A0A0A6YYK5 440 aaPredicted RBP16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 MKRN2OSH3BPM6 223 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 AURKAO14965 403 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 SPAG6O75602 509 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 MT-ND3P03897 115 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 KRT1P04264 644 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 FGF5P12034 268 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 HALP42357 657 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 ATP13A5Q4VNC0 1218 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 TEX44Q53QW1 395 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 CYB5D1Q6P9G0 228 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 FAM92BQ6ZTR7 304 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 B4GALNT4Q76KP1 1039 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 PPP1R3BQ86XI6 285 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 BRSK1Q8TDC3 778 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 KLHL6Q8WZ60 621 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 PADI1Q9ULC6 663 aa16.56■□□□□ 0.24
CAPRIN1-216ENST00000534042 CDC14CA4D256 554 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 AKR1B10O60218 316 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 KCNJ13O60928 360 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 NELFEP18615 380 aaKnown RBP16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 ARHGAP25P42331 645 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 DYNLT1P63172 113 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 ASTE1Q2TB18 679 aaPredicted RBP16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 C11orf96Q7Z7L8 435 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 RNF25Q96BH1 459 aaPredicted RBP16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 RAB33BQ9H082 229 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 PDE7BQ9NP56 450 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 UBP1Q9NZI7 540 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 WDR37Q9Y2I8 494 aa16.55■□□□□ 0.24
CAPRIN1-216ENST00000534042 COL12A1Q99715 3063 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 SEC16AO15027 2179 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 SPTBP11277 2137 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 SSU72P8A0A1W2PR75 194 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 PIPSLA2A3N6 862 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 GOLGA6L3A6NEY3 463 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 CREG1O75629 220 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 TPM3P06753 285 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 FURINP09958 794 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 NR1D1P20393 614 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 PTPN3P26045 913 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 HMGCLP35914 325 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 TNNT3P45378 269 aaPredicted RBP16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 DNASE1L3Q13609 305 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 LRRC38Q5VT99 294 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 TCTN3Q6NUS6 607 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 KLHL35Q6PF15 583 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 BZW1Q7L1Q6 419 aaKnown RBP16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 AMZ2Q86W34 360 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 TEX19Q8NA77 164 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 SIDT2Q8NBJ9 832 aaKnown RBP16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 OR8K1Q8NGG5 319 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 UBXN4Q92575 508 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 TEKT5Q96M29 485 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 TWSG1Q9GZX9 223 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 TRABDQ9H4I3 376 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 ZNHIT6Q9NWK9 470 aaKnown RBP16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 FAM153AQ9UHL3 310 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 RARRES3Q9UL19 164 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 PLAAQ9Y263 795 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 PCDHGA6Q9Y5G7 932 aa16.54■□□□□ 0.24
CAPRIN1-216ENST00000534042 SPTBN1Q01082 2364 aaKnown RBP16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 MED13Q9UHV7 2174 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 RFPL1O75677 317 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 RECKO95980 971 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 TNNT1P13805 278 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 FECHP22830 423 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 WNT3AP56704 352 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 ZDHHC20Q5W0Z9 365 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 RHOT2Q8IXI1 618 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 CT55Q8WUE5 264 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 FCRL4Q96PJ5 515 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 DNAJC7Q99615 494 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 ZCCHC2Q9C0B9 1178 aaKnown RBP16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 IL26Q9NPH9 171 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 LHX9Q9NQ69 397 aa16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 DDX56Q9NY93 547 aaKnown RBP16.53■□□□□ 0.24
CAPRIN1-216ENST00000534042 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.53■□□□□ 0.242e-7■□□□□ 9.7
CAPRIN1-216ENST00000534042 IGHV5-51A0A0C4DH38 117 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms