RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 ATP13A3Q9H7F0 1226 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 CAPN10Q9HC96 672 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 KCNIP3Q9Y2W7 256 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 TNFRSF10AO00220 468 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 NUPL2O15504 423 aaKnown RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 RFPL1O75677 317 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 CES1P23141 567 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 GADD45AP24522 165 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ATP5F1P24539 256 aaPredicted RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 HOXC12P31275 282 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 POLR2LP62875 67 aaKnown RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 TAGLNQ01995 201 aaKnown RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ILF3Q12906 894 aaKnown RBP eCLIP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 C4orf46Q504U0 113 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 SMYD5Q6GMV2 418 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 MCOLN2Q8IZK6 566 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ZFP28Q8NHY6 868 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 TBC1D15Q8TC07 691 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 RDH11Q8TC12 318 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 RRAGCQ9HB90 399 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ADAM28Q9UKQ2 775 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 PCDHB11Q9Y5F2 797 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 PCDHGA4Q9Y5G9 962 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ITGB4P16144 1822 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ATP6V1G2-DDX39BF2Z307 99 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 TULP3O75386 442 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ITGAVP06756 1048 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 CYP2A6P11509 494 aaPredicted RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 CDH17Q12864 832 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 PFKFB4Q16877 469 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 C10orf82Q8WW14 230 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 IPCEF1Q8WWN9 437 aaPredicted RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 MKL1Q969V6 931 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 DPCDQ9BVM2 203 aaPredicted RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 SEMA4BQ9NPR2 832 aaPredicted RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 SUCOQ9UBS9 1254 aaKnown RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 MAN2B2Q9Y2E5 1009 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 DOT1LQ8TEK3 1739 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 BANF1O75531 89 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 GCATO75600 419 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ATP6AP2O75787 350 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 PCDH8O95206 1070 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 CSF2P04141 144 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ICAM1P05362 532 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ZNF35P13682 527 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 KELP23276 732 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 DDX6P26196 483 aaKnown RBP eCLIP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 SLC7A1P30825 629 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 EML3Q32P44 896 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 MPP7Q5T2T1 576 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 RPTNQ6XPR3 784 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 TRMT11Q7Z4G4 463 aaKnown RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 PAQR7Q86WK9 346 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 KATNAL2Q8IYT4 538 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 TMEM109Q9BVC6 243 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 SPATA9Q9BWV2 254 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 WDR55Q9H6Y2 383 aaPredicted RBP7.78□□□□□ -1.16
CSRP1-218ENST00000533402 IFT52Q9Y366 437 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 SLIT2O94813 1529 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 EI24O14681 340 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 SUV39H1O43463 412 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 MATKP42679 507 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 GPR15P49685 360 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 RGS19P49795 217 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 SLC3A1Q07837 685 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 C1orf94Q6P1W5 598 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 FAM109AQ8N4B1 249 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 RIPOR3Q96MK2 946 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 PANX3Q96QZ0 392 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ZNF518BQ9C0D4 1074 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 FBXO44Q9H4M3 255 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 CDHR5Q9HBB8 845 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 ITM2CQ9NQX7 267 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 CORO2BQ9UQ03 480 aa7.78□□□□□ -1.16
CSRP1-218ENST00000533402 LOC100509620A0A075B734 347 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 KCNU1A8MYU2 1149 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 SCAMP1O15126 338 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 NUAK1O60285 661 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 MPZL2O60487 215 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 SLITRK5O94991 958 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 ACSL1P33121 698 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 TOB1P50616 345 aaPredicted RBP7.77□□□□□ -1.16
CSRP1-218ENST00000533402 SMARCB1Q12824 385 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 MYLK3Q32MK0 819 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 FAM182BQ5T319 152 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 FOXRED2Q8IWF2 684 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 SNIP1Q8TAD8 396 aaKnown RBP7.77□□□□□ -1.16
CSRP1-218ENST00000533402 UCK2Q9BZX2 261 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 CLPBQ9H078 707 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 ELOVL2Q9NXB9 296 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 CA5BQ9Y2D0 317 aa7.77□□□□□ -1.16
CSRP1-218ENST00000533402 PAPSS1O43252 624 aaPredicted RBP7.77□□□□□ -1.17
CSRP1-218ENST00000533402 XPNPEP2O43895 674 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 PLIN3O60664 434 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 VNN2O95498 520 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 F9P00740 461 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 ANXA5P08758 320 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 ANXA3P12429 323 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 COX7A2P14406 83 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms