RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	MT-ND3	P03897	115 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PDGFA	P04085	211 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	FOLR1	P15328	257 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	NELFE	P18615	380 aa	Known RBP	11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	CASP14	P31944	242 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PMS2	P54278	862 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	DCDC1	P59894	354 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PPP1CA	P62136	330 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	IFI35	P80217	286 aa	Predicted RBP	11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	CDK18	Q07002	472 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	KCNAB1	Q14722	419 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	AGAP9	Q5VTM2	703 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PDPK2P	Q6A1A2	396 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	HIST2H2BC	Q6DN03	193 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PWWP2B	Q6NUJ5	590 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	WASH2P	Q6VEQ5	465 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PRSS42	Q7Z5A4	293 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	SIDT2	Q8NBJ9	832 aa	Known RBP	11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	SPATA22	Q8NHS9	363 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	GDAP1	Q8TB36	358 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	IMP4	Q96G21	291 aa	Known RBP	11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	TTC25	Q96NG3	672 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	RUFY1	Q96T51	708 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	TIMM29	Q9BSF4	260 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	SLC25A51	Q9H1U9	297 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	WASH6P	Q9NQA3	447 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	POT1	Q9NUX5	634 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	EPHA6	Q9UF33	1036 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	RARRES3	Q9UL19	164 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	CAPN11	Q9UMQ6	739 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	VPS4A	Q9UN37	437 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	TLN1	Q9Y490	2541 aa	Known RBP	11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	NAV2	Q8IVL1	2488 aa		11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	UBR5	O95071	2799 aa	Predicted RBP	11.16	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PMPCB	O75439	489 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	POP7	O75817	140 aa	Known RBP	11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	MT-CYB	P00156	380 aa	Predicted RBP	11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	H2AFZ	P0C0S5	128 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	VCL	P18206	1134 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	GNLY	P22749	145 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	HAL	P42357	657 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	CAPZB	P47756	277 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	ARL4D	P49703	201 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	CCL11	P51671	97 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	ZBED6	P86452	979 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	FANCC	Q00597	558 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	SEMA5A	Q13591	1074 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	GTF2H3	Q13889	308 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	MESD	Q14696	234 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	IQCB1	Q15051	598 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	ATP13A5	Q4VNC0	1218 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	NPNT	Q6UXI9	565 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	CERS6	Q6ZMG9	384 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	H2AFV	Q71UI9	128 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	TRAPPC5	Q8IUR0	188 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	RBM12B	Q8IXT5	1001 aa	Known RBP	11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	TTC30B	Q8N4P2	665 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	TRIM55	Q9BYV6	548 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	RAB33B	Q9H082	229 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	ACTL8	Q9H568	366 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	CBX8	Q9HC52	389 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	UBP1	Q9NZI7	540 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PSMD13	Q9UNM6	376 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	LUC7L2	Q9Y383	392 aa	Known RBP	11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	PCDHGA6	Q9Y5G7	932 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	SPO11	Q9Y5K1	396 aa		11.15	□□□□□ -0.62
PTP4A2-211	ENST00000528840	MAST4	O15021	2626 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	LRRD1	A4D1F6	860 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	GOLGA6L3	A6NEY3	463 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	C21orf140	B9A014	251 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	APOL1	O14791	398 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	UGT1A9	O60656	530 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	NDST3	O95803	873 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	EBLN1	P0CF75	366 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	UGT1A6	P19224	532 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	UGT1A1	P22309	533 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	UGT1A4	P22310	534 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	FECH	P22830	423 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	PTPN4	P29074	926 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	UQCRFS1	P47985	274 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	UBASH3A	P57075	661 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	RPS18	P62269	152 aa	Known RBP	11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	RPS15	P62841	145 aa	Known RBP	11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	PDE1B	Q01064	536 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	TUBB3	Q13509	450 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	PDK1	Q15118	436 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	RPE65	Q16518	533 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	NADK2	Q4G0N4	442 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	FHL5	Q5TD97	284 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	CYB5D1	Q6P9G0	228 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	TMEM220	Q6QAJ8	160 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	C11orf96	Q7Z7L8	435 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	AMZ2	Q86W34	360 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	BPHL	Q86WA6	291 aa	Predicted RBP	11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	APLF	Q8IW19	511 aa	Predicted RBP	11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	PLD5	Q8N7P1	536 aa		11.14	□□□□□ -0.63
PTP4A2-211	ENST00000528840	CPT1C	Q8TCG5	803 aa		11.14	□□□□□ -0.63

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