RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CYP4F12Q9HCS2 524 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 TM7SF3Q9NS93 570 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 ARGLU1Q9NWB6 273 aaPredicted RBP15.13■□□□□ 0.01
LSM1-203ENST00000520755 VPS18Q9P253 973 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 EXOC1LA0A1B0GW35 172 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 PRSS38A1L453 326 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 TNFRSF10CO14798 259 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 SGTAO43765 313 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 RASGRP1O95267 797 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 TNFP01375 233 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 CSF2P04141 144 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 EPHA8P29322 1005 aaPredicted RBP15.12■□□□□ 0.01
LSM1-203ENST00000520755 GNPDA1P46926 289 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 LEPRP48357 1165 aaKnown RBP15.12■□□□□ 0.01
LSM1-203ENST00000520755 HK3P52790 923 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 BNIP3Q12983 259 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 NAB1Q13506 487 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 ITIH4Q14624 930 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 KLHL38Q2WGJ6 581 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 AARS2Q5JTZ9 985 aaKnown RBP15.12■□□□□ 0.01
LSM1-203ENST00000520755 CNSTQ6PJW8 725 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 PACS1Q6VY07 963 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 KIAA0408Q6ZU52 694 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 SLC26A11Q86WA9 606 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 GATAD2AQ86YP4 633 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 CTAGE3PQ8IX95 158 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 IQCKQ8N0W5 287 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 EPS8L3Q8TE67 593 aaKnown RBP15.12■□□□□ 0.01
LSM1-203ENST00000520755 DCAKDQ8WVC6 231 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 SLC44A1Q8WWI5 657 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.12■□□□□ 0.01
LSM1-203ENST00000520755 SLC13A1Q9BZW2 595 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 OR2AG1Q9H205 316 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 P2RY12Q9H244 342 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 CARS2Q9HA77 564 aaKnown RBP15.12■□□□□ 0.01
LSM1-203ENST00000520755 DNAAF2Q9NVR5 837 aaKnown RBP15.12■□□□□ 0.01
LSM1-203ENST00000520755 ZDHHC3Q9NYG2 299 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 EURLQ9NYK6 297 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 ATXN10Q9UBB4 475 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 APOBEC3BQ9UH17 382 aaKnown RBP15.12■□□□□ 0.01
LSM1-203ENST00000520755 SUFUQ9UMX1 484 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 PLAAQ9Y263 795 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 SLC17A4Q9Y2C5 497 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 PCYT1BQ9Y5K3 369 aaPredicted RBP15.12■□□□□ 0.01
LSM1-203ENST00000520755 PRSS21Q9Y6M0 314 aa15.12■□□□□ 0.01
LSM1-203ENST00000520755 RIF1Q5UIP0 2472 aaKnown RBP15.11■□□□□ 0.01
LSM1-203ENST00000520755 YKT6O15498 198 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 HAUS5O94927 633 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 AHSGP02765 367 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 CTSEP14091 401 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 AKT1P31749 480 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 RXRGP48443 463 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 TTPAP49638 278 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 BLKP51451 505 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 HNRNPKP61978 463 aaKnown RBP eCLIP15.11■□□□□ 0.01
LSM1-203ENST00000520755 CASP8Q14790 479 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 PRRT3Q5FWE3 981 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 CTSL3PQ5NE16 218 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 ZNF549Q6P9A3 640 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 CERS6Q6ZMG9 384 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 STRA8Q7Z7C7 330 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 ADGRG6Q86SQ4 1221 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 ZC3HC1Q86WB0 502 aaKnown RBP15.11■□□□□ 0.01
LSM1-203ENST00000520755 LRRC6Q86X45 466 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 ACVR1CQ8NER5 493 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 SCG3Q8WXD2 468 aaKnown RBP15.11■□□□□ 0.01
LSM1-203ENST00000520755 CDKL2Q92772 493 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 MRRFQ96E11 262 aaKnown RBP15.11■□□□□ 0.01
LSM1-203ENST00000520755 ZIM3Q96PE6 472 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 RBBP8Q99708 897 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 CPNE1Q99829 537 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 TRIM39Q9HCM9 518 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 INTS10Q9NVR2 710 aaKnown RBP15.11■□□□□ 0.01
LSM1-203ENST00000520755 ZNF446Q9NWS9 450 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 CTNNAL1Q9UBT7 734 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 DGKBQ9Y6T7 804 aa15.11■□□□□ 0.01
LSM1-203ENST00000520755 HMX2A2RU54 273 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 POC1B-GALNT4F8VUJ3 575 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 PIAS2O75928 621 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 FUCA1P04066 466 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 IVLP07476 585 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 ZNF883P0CG24 379 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 ZNF8P17098 575 aaPredicted RBP15.1■□□□□ 0.01
LSM1-203ENST00000520755 MSH3P20585 1137 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 GP5P40197 560 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 CTSCP53634 463 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 CSE1LP55060 971 aaKnown RBP15.1■□□□□ 0.01
LSM1-203ENST00000520755 ZNF844Q08AG5 666 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 C1orf61Q13536 156 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 GTF2H3Q13889 308 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 LDLRAP1Q5SW96 308 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 RBM20Q5T481 1227 aaKnown RBP15.1■□□□□ 0.01
LSM1-203ENST00000520755 RNF187Q5TA31 235 aaPredicted RBP15.1■□□□□ 0.01
LSM1-203ENST00000520755 LYPLAL1Q5VWZ2 237 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 GALNT13Q8IUC8 556 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 SPNS2Q8IVW8 549 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 CLDN19Q8N6F1 224 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 RASGEF1AQ8N9B8 481 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 ZNF548Q8NEK5 533 aaPredicted RBP15.1■□□□□ 0.01
LSM1-203ENST00000520755 LKAAEAR1Q8TD35 194 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms