RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 RGS19P49795 217 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 MCCD1P59942 119 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 KLF1Q13351 362 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ZNHIT3Q15649 155 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 SFT2D3Q587I9 215 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 STXBP5Q5T5C0 1151 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 LRRC55Q6ZSA7 311 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 HM13Q8TCT9 377 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 TM6SF2Q9BZW4 377 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ACSS3Q9H6R3 686 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 TBC1D30Q9Y2I9 924 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 MEN1O00255 615 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 PLK4O00444 970 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 APOC1P02654 83 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 APOC3P02656 99 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 CSF2P04141 144 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 IDO1P14902 403 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 TUBG1P23258 451 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ICAM3P32942 547 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 RPL7AP62424 266 aaKnown RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 GALNT3Q14435 633 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 SHQ1Q6PI26 577 aaKnown RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 C14orf80Q86SX3 495 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 RBM23Q86U06 439 aaKnown RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 VANGL1Q8TAA9 524 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 IFT80Q9P2H3 777 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 NPEPPSL1A6NEC2 478 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 SUV39H1O43463 412 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 CATP04040 527 aaKnown RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ANXA5P08758 320 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 PORP16435 677 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 HOXB8P17481 243 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-206ENST00000520002 PSEN2P49810 448 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 TAS2R41P59536 307 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 TLR1Q15399 786 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 MOGQ16653 247 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ZCCHC12Q6PEW1 402 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 SNX20Q7Z614 316 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 FAM71AQ8IYT1 594 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 LEMD2Q8NC56 503 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 SEMA3CQ99985 751 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ASB8Q9H765 288 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ANKRA2Q9H9E1 313 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ABRQ12979 859 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 MAP4K3Q8IVH8 894 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 PLEKHO2Q8TD55 490 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 PPP1R16AQ96I34 528 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 EXOC2Q96KP1 924 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 DCSTAMPQ9H295 470 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 FANCFQ9NPI8 374 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 ABCC13Q9NSE7 274 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 SOHLH2Q9NX45 425 aa8.63□□□□□ -1.03
CSMD1-206ENST00000520002 PAPSS1O43252 624 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CTBP1Q13363 440 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 POTEHQ6S545 545 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CMC1Q7Z7K0 106 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 TMEM86AQ8N2M4 240 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 ALG3Q92685 438 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 KCNQ5Q9NR82 932 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 LMTK2Q8IWU2 1503 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 A0A1W2PPW3 197 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CHP2O43745 196 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CCNYL3P0C7X3 344 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 ZNF81P51508 661 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CLCN5P51795 746 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 FAM76BQ5HYJ3 339 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 MIIPQ5JXC2 388 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CFAP206Q8IYR0 622 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CD300LFQ8TDQ1 290 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 JPH3Q8WXH2 748 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 TLCD1Q96CP7 247 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 IGFLR1Q9H665 355 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 SNX15Q9NRS6 342 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 C14orf119Q9NWQ9 140 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 RAP2CQ9Y3L5 183 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 BMP6P22004 513 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 SLC6A2P23975 617 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 MFSD5Q6N075 450 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 KLHL35Q6PF15 583 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CD101Q93033 1021 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 RERGQ96A58 199 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 PPP3R2Q96LZ3 170 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 DPCDQ9BVM2 203 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 DDX4Q9NQI0 724 aaKnown RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 AKAP7Q9P0M2 348 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 UXTQ9UBK9 157 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 TRAV19A0A0A6YYK7 116 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 SLC22A3O75751 556 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 CTPS1P17812 591 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 ACADLP28330 430 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 ELP6Q0PNE2 266 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 SSX2Q16385 188 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 PTPRNQ16849 979 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 ANKDD1AQ495B1 522 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 ARMC10Q8N2F6 343 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 SNRNP25Q9BV90 132 aaKnown RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 ADARB2Q9NS39 739 aaKnown RBP8.62□□□□□ -1.03
CSMD1-206ENST00000520002 FBXL21Q9UKT6 434 aa8.62□□□□□ -1.03
CSMD1-206ENST00000520002 HIF3AQ9Y2N7 669 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms