RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ADARB2Q9NS39 739 aaKnown RBP3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZBTB40Q9NUA8 1239 aa3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 DDX43Q9NXZ2 648 aaKnown RBP3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 AGO1Q9UL18 857 aaKnown RBP3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 PADI3Q9ULW8 664 aa3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 PAM16Q9Y3D7 125 aa3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 GRIP1Q9Y3R0 1128 aa3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 PCDHGA5Q9Y5G8 931 aa3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 SNX5Q9Y5X3 404 aa3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 HS3ST3A1Q9Y663 406 aa3.28□□□□□ -1.88
RNU6-840P-201ENST00000517275 H0YAE9 185 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 TRIM77I1YAP6 450 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 DNM1LO00429 736 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 HS3ST1O14792 307 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 ANKRD28O15084 1053 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 TO15178 435 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 IPO8O15397 1037 aaKnown RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 PLPP2O43688 288 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 SSX4O60224 188 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 RFPL2O75678 378 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 SLC22A3O75751 556 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 PENKP01210 267 aaPredicted RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 CELA2AP08217 269 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 G6PDP11413 515 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 EEF2P13639 858 aaKnown RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 NAGAP17050 411 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 NMBRP28336 390 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 TIA1P31483 386 aaKnown RBP eCLIP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 HNF4AP41235 474 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 ARHGAP25P42331 645 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 MATR3P43243 847 aaKnown RBP eCLIP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 MXI1P50539 228 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 ASCL1P50553 236 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 CLCNKAP51800 687 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 CLDN20P56880 219 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 RBPJQ06330 500 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 KRT33BQ14525 404 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 HNF4GQ14541 408 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 TWIST1Q15672 202 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 ASIC2Q16515 512 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 AMZ1Q400G9 498 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 Q4G0T1 1027 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 EFHC1Q5JVL4 640 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 DNTTIP2Q5QJE6 756 aaKnown RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 OTUD1Q5VV17 481 aaPredicted RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 C18orf63Q68DL7 685 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 NOTUMQ6P988 496 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 LINGO4Q6UY18 593 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 PPP1R21Q6ZMI0 780 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 C15orf39Q6ZRI6 1047 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 RD3Q7Z3Z2 195 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 YTHDF3Q7Z739 585 aaKnown RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 DSG4Q86SJ6 1040 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 TMEM173Q86WV6 379 aaPredicted RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 FBXO39Q8N4B4 442 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 EMC1Q8N766 993 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 NAT8LQ8N9F0 302 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 C7orf57Q8NEG2 295 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 OR2AK2Q8NG84 335 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 OCC1Q8TAD7 63 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 TBC1D16Q8TBP0 767 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 WDR20Q8TBZ3 569 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 GRAPLQ8TC17 118 aaPredicted RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 SLAMF9Q96A28 289 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 SPSB1Q96BD6 273 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 ERLEC1Q96DZ1 483 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 CAMK1GQ96NX5 476 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 SLX1AQ9BQ83 275 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 FERMT1Q9BQL6 677 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 INPP5KQ9BT40 448 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 PI4K2AQ9BTU6 479 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 POLDIP3Q9BY77 421 aaKnown RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 FAM129AQ9BZQ8 928 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 ISCUQ9H1K1 167 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 FZD8Q9H461 694 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 GOLPH3LQ9H4A5 285 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 MRPL44Q9H9J2 332 aaKnown RBP3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 DBNDD1Q9H9R9 158 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 IL1RAPL2Q9NP60 686 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 HEY2Q9UBP5 337 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 COG5Q9UP83 839 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 KNSTRNQ9Y448 316 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 PCDHAC2Q9Y5I4 1007 aa3.27□□□□□ -1.89
RNU6-840P-201ENST00000517275 ATXN2Q99700 1313 aaKnown RBP3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 LY6G6EA0A0G2JKS1 128 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 A0A0U1RQJ8 604 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 ARHGEF37A1IGU5 675 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 A4D1N5 150 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 ANKUB1A6NFN9 424 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 OOEPA6NGQ2 149 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 C5orf52A6NGY3 159 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 HEPACAM2A8MVW5 462 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 B4DGG1 531 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 CLDN4O14493 209 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 ADAM10O14672 748 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 SPRY3O43610 288 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 HTATSF1O43719 755 aaKnown RBP3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 ZIC3O60481 467 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 NDUFB8O95169 186 aa3.26□□□□□ -1.89
RNU6-840P-201ENST00000517275 FGBP02675 491 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms