RNA–Protein interactions for RNA: ENST00000514603.1

GYPA-210, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-210ENST00000514603 DDX25Q9UHL0 483 aaKnown RBP4.49□□□□□ -1.69
GYPA-210ENST00000514603 TSPYL4Q9UJ04 414 aa4.49□□□□□ -1.69
GYPA-210ENST00000514603 VDAC3Q9Y277 283 aa4.49□□□□□ -1.69
GYPA-210ENST00000514603 PTPRCP08575 1304 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 ARHGEF40Q8TER5 1519 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 ANKRD66B4E2M5 251 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 UBE2CO00762 179 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 TSPAN1O60635 241 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 KCNK5O95279 499 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 GGPS1O95749 300 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 SP100P23497 879 aaPredicted RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 TKTP29401 623 aaKnown RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 SEC61A1P61619 476 aaKnown RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 EEF1A1P68104 462 aaKnown RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 MYBPHQ13203 477 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 ALCAMQ13740 583 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 SNAPC1Q16533 368 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 PAPPA-AS1Q5QFB9 102 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 EEF1A1P5Q5VTE0 462 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 RPUSD3Q6P087 351 aaKnown RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 RHBDF2Q6PJF5 856 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 MEPCEQ7L2J0 689 aaKnown RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 LDB1Q86U70 411 aaPredicted RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 AACSQ86V21 672 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 NUDCD2Q8WVJ2 157 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 PIGTQ969N2 578 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 PGAP3Q96FM1 320 aaPredicted RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 NEK1Q96PY6 1258 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 CSF3RQ99062 836 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 MOV10L1Q9BXT6 1211 aaKnown RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 TM6SF1Q9BZW5 370 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 OR10A4Q9H209 315 aa4.48□□□□□ -1.69
GYPA-210ENST00000514603 RCC2Q9P258 522 aaKnown RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 WBP11Q9Y2W2 641 aaKnown RBP4.48□□□□□ -1.69
GYPA-210ENST00000514603 SRRM3A6NNA2 597 aaPredicted RBP4.47□□□□□ -1.69
GYPA-210ENST00000514603 H7C0S8 307 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 PLPP2O43688 288 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 POLR2CP19387 275 aaPredicted RBP4.47□□□□□ -1.69
GYPA-210ENST00000514603 HRH2P25021 359 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 CCKBRP32239 447 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 AMPHP49418 695 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 CSE1LP55060 971 aaKnown RBP4.47□□□□□ -1.69
GYPA-210ENST00000514603 CLDN20P56880 219 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 TUBA1BP68363 451 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 PPP2R2BQ00005 443 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 PLIN5Q00G26 463 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 SPOCK1Q08629 439 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 NFATC4Q14934 902 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 NR1D2Q14995 579 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 SETMARQ53H47 684 aaPredicted RBP4.47□□□□□ -1.69
GYPA-210ENST00000514603 KRTCAP3Q53RY4 240 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 SPECC1Q5M775 1068 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 CST9LP1Q5W188 147 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 PLEKHM3Q6ZWE6 761 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 CHST3Q7LGC8 479 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 GALNT13Q8IUC8 556 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 MAP7D3Q8IWC1 876 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 C1orf52Q8N6N3 182 aaKnown RBP4.47□□□□□ -1.69
GYPA-210ENST00000514603 SLC38A5Q8WUX1 472 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 RMDN1Q96DB5 314 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 TMEM19Q96HH6 336 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 SPATA17Q96L03 361 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 CFAP57Q96MR6 1250 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 IL25Q9H293 177 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 PIH1D3Q9NQM4 214 aaKnown RBP4.47□□□□□ -1.69
GYPA-210ENST00000514603 PFDN4Q9NQP4 134 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 GDE1Q9NZC3 331 aa4.47□□□□□ -1.69
GYPA-210ENST00000514603 TMEM189-UBE2V1I3L0A0 370 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 SSX4O60224 188 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 TBCAO75347 108 aaKnown RBP4.46□□□□□ -1.7
GYPA-210ENST00000514603 ZNF217O75362 1048 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 KDM4BO94953 1096 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 ZWINTO95229 277 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 CLDN14O95500 239 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 BCL10O95999 233 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 FYNP06241 537 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 CCDC175P0C221 793 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 S1PR1P21453 382 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 NMBRP28336 390 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 IL15P40933 162 aaPredicted RBP4.46□□□□□ -1.7
GYPA-210ENST00000514603 ZNF75DP51815 510 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 POU5F1Q01860 360 aaKnown RBP4.46□□□□□ -1.7
GYPA-210ENST00000514603 KIF5AQ12840 1032 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 ZNF155Q12901 538 aaPredicted RBP4.46□□□□□ -1.7
GYPA-210ENST00000514603 UBE2V1Q13404 147 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 KEAP1Q14145 624 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 ZNF234Q14588 700 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 CCDC96Q2M329 555 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 LETM2Q2VYF4 491 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 CRY2Q49AN0 593 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 CBWD6Q4V339 395 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 CBWD3Q5JTY5 395 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 C1orf141Q5JVX7 400 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 ZNF324BQ6AW86 544 aaPredicted RBP4.46□□□□□ -1.7
GYPA-210ENST00000514603 NADSYN1Q6IA69 706 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 KIAA1161Q6NSJ0 714 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 CCDC186Q7Z3E2 898 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 KRT77Q7Z794 578 aa4.46□□□□□ -1.7
GYPA-210ENST00000514603 TMEM173Q86WV6 379 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms