RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CDK4P11802 303 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 F3P13726 295 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 MGAT1P26572 445 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 AKT1P31749 480 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 FOXN2P32314 431 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 SLC19A1P41440 591 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 ITGA9Q13797 1035 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 SPIDRQ14159 915 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 KCNJ11Q14654 390 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 DBN1Q16643 649 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 ZRANB3Q5FWF4 1079 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 C3orf38Q5JPI3 329 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 LDLRAP1Q5SW96 308 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 TSTD2Q5T7W7 516 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 DUS1LQ6P1R4 473 aaKnown RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 CCDC137Q6PK04 289 aaKnown RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 RBM44Q6ZP01 1051 aaKnown RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 LDB1Q86U70 411 aaPredicted RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 NXPE1Q8N323 547 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 MPP5Q8N3R9 675 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 CLDN19Q8N6F1 224 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 GPR150Q8NGU9 434 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 ACTRT1Q8TDG2 376 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 STYXQ8WUJ0 223 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 CPT1BQ92523 772 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 ANP32BQ92688 251 aaKnown RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 HDAC10Q969S8 669 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 PPP1R2P1Q96PQ5 205 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 DEPDC7Q96QD5 511 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 GFM1Q96RP9 751 aaKnown RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 TBC1D10AQ9BXI6 508 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 DDX47Q9H0S4 455 aaKnown RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 CHRAC1Q9NRG0 131 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 SYBUQ9NX95 663 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 MARCH4Q9P2E8 410 aaPredicted RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 FEZ2Q9UHY8 353 aaPredicted RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 CRLS1Q9UJA2 301 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 SATB2Q9UPW6 733 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 RAXQ9Y2V3 346 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 PKD1L2Q7Z442 2459 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 DSPP15924 2871 aaKnown RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 IGHV1OR21-1A0A087WYE8 117 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 ERI2A8K979 691 aaKnown RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 RHPN2P1A8MT19 583 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 H7C0S8 307 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 PHF2O75151 1096 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 PPFIA2O75334 1257 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 ZNF189O75820 626 aaPredicted RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 GOT2P00505 430 aaKnown RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 MSH3P20585 1137 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 NMBRP28336 390 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 ACTN2P35609 894 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 CLCNKAP51800 687 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 UBE2IP63279 158 aaKnown RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 GPS1Q13098 491 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 NR1D2Q14995 579 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 RTP5Q14D33 572 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 ZDHHC20Q5W0Z9 365 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 PAPD7Q5XG87 772 aaKnown RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 FOXR1Q6PIV2 292 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 NAPRTQ6XQN6 538 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 TAS2R42Q7RTR8 314 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 SNX20Q7Z614 316 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 LINC00523Q86TU6 105 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 CAND1Q86VP6 1230 aaKnown RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 PROSER1Q86XN7 944 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 CREG2Q8IUH2 290 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 SLITRK4Q8IW52 837 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 CACTIN-AS1Q8N1I8 211 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 RCBTB1Q8NDN9 531 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 SPDYE1Q8NFV5 336 aaPredicted RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 TIMM29Q9BSF4 260 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 CCDC86Q9H6F5 360 aaKnown RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 EPB41L5Q9HCM4 733 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 EVA1BQ9NVM1 165 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 OGFRQ9NZT2 677 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 TCAF1Q9Y4C2 921 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 CFAP20Q9Y6A4 193 aaKnown RBP13.33□□□□□ -0.28
SNF8-206ENST00000509989 AK5Q9Y6K8 562 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 SLC30A1Q9Y6M5 507 aa13.33□□□□□ -0.28
SNF8-206ENST00000509989 IGLV3-16A0A075B6K0 115 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 PDZK1P1A8MUH7 402 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 GOLGA8MH3BSY2 632 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 OR1I1O60431 355 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 SNRNP200O75643 2136 aaKnown RBP13.32□□□□□ -0.28
SNF8-206ENST00000509989 PNLIPP16233 465 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 ITGALP20701 1170 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 ADRA1DP25100 572 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 MSNP26038 577 aaKnown RBP13.32□□□□□ -0.28
SNF8-206ENST00000509989 ACRV1P26436 265 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 ETV5P41161 510 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 PTGIRP43119 386 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 FASLGP48023 281 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 GABREP78334 506 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 MRPS25P82663 173 aaKnown RBP13.32□□□□□ -0.28
SNF8-206ENST00000509989 HHEXQ03014 270 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 ACVR1Q04771 509 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 CCDC173Q0VFZ6 552 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms