RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 RNASEH2BQ5TBB1 312 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 AFTPHQ6ULP2 937 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 XKR5Q6UX68 686 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 TAS2R42Q7RTR8 314 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 ZNF438Q7Z4V0 828 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 DCBLD1Q8N8Z6 715 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 MCUQ8NE86 351 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 PEX13Q92968 403 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 SERPINB12Q96P63 405 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 COPS8Q99627 209 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 KIFC1Q9BW19 673 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 SCHIP1Q9P0W5 487 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 LRIT1Q9P2V4 623 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 ASIC3Q9UHC3 531 aa17.95■□□□□ 0.46
PDLIM7-216ENST00000506537 A0A1W2PQM1 296 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 CCDC188H7C350 402 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 AP3B1O00203 1094 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 NTN3O00634 580 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 PPM1DO15297 605 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 POP7O75817 140 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 MT-CO3P00414 261 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 F3P13726 295 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 IVDP26440 423 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 MAGEA3P43357 314 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 CCL7P80098 99 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 DR1Q01658 176 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 DMPKQ09013 629 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 CAMK2BQ13554 666 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 SEMA3AQ14563 771 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 NR1D2Q14995 579 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 IYDQ6PHW0 289 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 CES3Q6UWW8 571 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 FAM83HQ6ZRV2 1179 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 SPRED1Q7Z699 444 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 JAMLQ86YT9 394 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 AGGF1Q8N302 714 aaeCLIP17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 Q8N9G6 341 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 GATA6Q92908 595 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 TRIM56Q9BRZ2 755 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 TRIM51Q9BSJ1 452 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 MRM3Q9HC36 420 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 SOX13Q9UN79 622 aa17.94■□□□□ 0.46
PDLIM7-216ENST00000506537 DNALI1O14645 258 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 TTI1O43156 1089 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 MLNP12872 115 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 ATP1B2P14415 290 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 JUPP14923 745 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 BRAFP15056 766 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 PNLIPP16233 465 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 ARNTP27540 789 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 PBLDP30039 288 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 FASLGP48023 281 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 PRLHRP49683 370 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 PDX1P52945 283 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 SARNPP82979 210 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 TARDBPQ13148 414 aaKnown RBP eCLIP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 NFE2L1Q14494 772 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 SEPT7Q16181 437 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 AMZ2Q86W34 360 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 CCNJLQ8IV13 435 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 PPIL6Q8IXY8 311 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 OR6P1Q8NGX9 317 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 OR4L1Q8NH43 312 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 MFSD3Q96ES6 412 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 DCUN1D1Q96GG9 259 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 ZNF514Q96K75 400 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 KRT12Q99456 494 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 ABCG4Q9H172 646 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 SYNDIG1Q9H7V2 258 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 XAB2Q9HCS7 855 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 CLCA2Q9UQC9 943 aa17.93■□□□□ 0.46
PDLIM7-216ENST00000506537 CFAP99D6REC4 459 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 RPLP0P05388 317 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 RALBP11234 206 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 RPL10P27635 214 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 DRG2P55039 364 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 PRAMEP78395 509 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 IZUMO3Q5VZ72 239 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 SYDE1Q6ZW31 735 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 ZNF761Q86XN6 746 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 CACTIN-AS1Q8N1I8 211 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 CLDN19Q8N6F1 224 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 SPATA4Q8NEY3 305 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 HEXDCQ8WVB3 486 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 SGSM3Q96HU1 749 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 LINC00615Q96LM1 132 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 RUNDC3BQ96NL0 473 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 LRRN3Q9H3W5 708 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 MARCH4Q9P2E8 410 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 WDR37Q9Y2I8 494 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 DNMT3AQ9Y6K1 912 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 PRSS21Q9Y6M0 314 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 ACACBO00763 2458 aa17.92■□□□□ 0.46
PDLIM7-216ENST00000506537 KIR2DS5A0A0G2JLQ3 304 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 A0A0G2JNG1 304 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 MGAT4DA6NG13 374 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 RHPN2P1A8MT19 583 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 PDZK1P1A8MUH7 402 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 C1QTNF9BB2RNN3 333 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms