RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 DSC1Q08554 894 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 GTF2H2Q13888 395 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 FAM98BQ52LJ0 330 aaKnown RBP13.94□□□□□ -0.18
TCOF1-207ENST00000504761 GTF2H2CQ6P1K8 395 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 GPR180Q86V85 440 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 OLFM3Q96PB7 478 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 ERAL1O75616 437 aaKnown RBP13.94□□□□□ -0.18
TCOF1-207ENST00000504761 KCNH1O95259 989 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 PRSS56P0CW18 603 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 PSMC3P17980 439 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 EFNA1P20827 205 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-207ENST00000504761 CRATP43155 626 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 PTDSS1P48651 473 aaKnown RBP13.94□□□□□ -0.18
TCOF1-207ENST00000504761 STC1P52823 247 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 CHIT1Q13231 466 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 PRMT9Q6P2P2 845 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 PRR23CQ6ZRP0 262 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 OVCA2Q8WZ82 227 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 HERVK_113Q902F9 699 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 RIPOR3Q96MK2 946 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 RNF38Q9H0F5 515 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 LRMDAQ9H2I8 198 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 SGK2Q9HBY8 427 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 TAS2R1Q9NYW7 299 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 MOCS1Q9NZB8 636 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 NDOR1Q9UHB4 597 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 CORO1CQ9ULV4 474 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-207ENST00000504761 TCRBV5S1A1TA0A578 114 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 GSAPA4D1B5 854 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 ECI2O75521 394 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 CTSAP10619 480 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 GNPDA1P46926 289 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 ZDHHC20Q5W0Z9 365 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 TMEM135Q86UB9 458 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 P3H2Q8IVL5 708 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 PANX1Q96RD7 426 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 MTG2Q9H4K7 406 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 FAM53CQ9NYF3 392 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 USP3Q9Y6I4 520 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 WNT9AO14904 365 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 MMP20O60882 483 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 CYP7B1O75881 506 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 LDLRP01130 860 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 AMD1P17707 334 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 TRIM74Q86UV6 250 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 DSELQ8IZU8 1212 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 KRT78Q8N1N4 520 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 LEMD2Q8NC56 503 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 SPHK2Q9NRA0 654 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 ZDHHC2Q9UIJ5 367 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 PRDM4Q9UKN5 801 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 NDUFS2O75306 463 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 EPN2O95208 641 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 RAB41Q5JT25 222 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 CAPN13Q6MZZ7 669 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TPRG1Q6ZUI0 275 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 RPAINQ86UA6 219 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 RALGPS2Q86X27 583 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-207ENST00000504761 AHI1Q8N157 1196 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 GAS2L1Q99501 681 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TRMT61BQ9BVS5 477 aaKnown RBP13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TXLNGYQ9BZA5 131 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 AP4S1Q9Y587 144 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 GRXCR1A8MXD5 290 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TMEM189-UBE2V1I3L0A0 370 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 ATF6P18850 670 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 EPORP19235 508 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 CD70P32970 193 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 MGAT3Q09327 533 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 CCDC81Q6ZN84 652 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 RTP3Q9BQQ7 232 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TMEM79Q9BSE2 394 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TMEM30AQ9NV96 361 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 CHCHD3Q9NX63 227 aaKnown RBP13.93□□□□□ -0.18
TCOF1-207ENST00000504761 IL36AQ9UHA7 158 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TMCO1Q9UM00 188 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 C15orf41Q9Y2V0 281 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 PRKAB1Q9Y478 270 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 SLC28A1O00337 649 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 EPOP01588 193 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 GGT5P36269 586 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 HPCAL1P37235 193 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 FBXW4P57775 412 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TGM3Q08188 693 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 MBTPS1Q14703 1052 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 XKR4Q5GH76 650 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 CYP20A1Q6UW02 462 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 VPS33AQ96AX1 596 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 MTERF1Q99551 399 aaKnown RBP13.93□□□□□ -0.18
TCOF1-207ENST00000504761 TEX12Q9BXU0 123 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 EPB41L4BQ9H329 900 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 DENND2DQ9H6A0 471 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-207ENST00000504761 LRTM1Q9HBL6 345 aa13.93□□□□□ -0.18
TCOF1-207ENST00000504761 CFAP20Q9Y6A4 193 aaKnown RBP13.93□□□□□ -0.18
TCOF1-207ENST00000504761 SF1Q15637 639 aaKnown RBP13.92□□□□□ -0.18
TCOF1-207ENST00000504761 RIN3Q8TB24 985 aa13.92□□□□□ -0.18
TCOF1-207ENST00000504761 PNPT1Q8TCS8 783 aaKnown RBP13.92□□□□□ -0.18
TCOF1-207ENST00000504761 DNAJC28Q9NX36 388 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms