RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ZSCAN5CA6NGD5 496 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM110-MUSTN1A8MSY1 372 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 F8VZ95 297 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CACNB4O00305 520 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 EPHB6O15197 1021 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 RECQL5O94762 991 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 LSM8O95777 96 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CYP1A1P04798 512 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 GOLGA6DP0CG33 693 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 MMP8P22894 467 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 ITGA3P26006 1051 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 AK4P27144 223 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 ALDH4A1P30038 563 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 HNRNPH3P31942 346 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 PTGER4P35408 488 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 PTPN9P43378 593 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 NSFP46459 744 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 PEX5P50542 639 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 PGDP52209 483 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CDR2Q01850 454 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 ABHD18Q0P651 414 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 ACOX1Q15067 660 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 DPCR1Q3MIW9 517 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 C14orf28Q4W4Y0 310 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 INO80DQ53TQ3 878 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CERCAMQ5T4B2 595 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 DCAF12Q5T6F0 453 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 NKAIN2Q5VXU1 208 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 SPECC1LQ69YQ0 1117 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 DOK6Q6PKX4 331 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF517Q6ZMY9 492 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 ARHGAP36Q6ZRI8 547 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 STRADAQ7RTN6 431 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 KDELC2Q7Z4H8 507 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 SRLQ86TD4 932 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CDH24Q86UP0 819 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 PIM3Q86V86 326 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 DNAAF5Q86Y56 855 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 NRSN1Q8IZ57 195 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CISD2Q8N5K1 135 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 RBMXL3Q8N7X1 1067 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 MLKLQ8NB16 471 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 OR56A4Q8NGH8 313 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 PATE1Q8WXA2 126 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 RTP4Q96DX8 246 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CCDC120Q96HB5 630 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 TBATAQ96M53 351 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 FRMD6Q96NE9 622 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 MCEEQ96PE7 176 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 EFHD1Q9BUP0 239 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 LGR4Q9BXB1 951 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 NAA15Q9BXJ9 866 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 STK33Q9BYT3 514 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 SLC39A8Q9C0K1 460 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CARS2Q9HA77 564 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 MLXIPLQ9NP71 852 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 SLAMF7Q9NQ25 335 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 PRDM7Q9NQW5 492 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 FAM207AQ9NSI2 230 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 SPATS2LQ9NUQ6 558 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 GOLGA6AQ9NYA3 693 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 AKAP7Q9P0M2 348 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 RCOR3Q9P2K3 495 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 NOCTQ9UK39 431 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CROTQ9UKG9 612 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 POLHQ9Y253 713 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 ATP8A1Q9Y2Q0 1164 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 PLEKHM1Q9Y4G2 1056 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 CHD5Q8TDI0 1954 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 A0A0U1RQS6 177 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 GOLGA6L3A6NEY3 463 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 RHPN2P1A8MT19 583 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 A8MU76 341 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 TMCO5BA8MYB1 307 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 DFFAO00273 331 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 TOR1BO14657 336 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 HGSO14964 777 aaPredicted RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 DAPK3O43293 454 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 PALMO75781 387 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CPNE6O95741 557 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 ELFN1P0C7U0 828 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 PNLIPP16233 465 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SOX5P35711 763 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 MMP12P39900 470 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 STAT1P42224 750 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 GNPDA1P46926 289 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 POLD2P49005 469 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 PAPOLAP51003 745 aaKnown RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SCNN1BP51168 640 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CCL11P51671 97 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 YBEYP58557 167 aaPredicted RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 TPI1P60174 286 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 RPL7AP62424 266 aaKnown RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 BCL2L1Q07817 233 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 RALGDSQ12967 914 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 PTP4A2Q12974 167 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CHAF1BQ13112 559 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 MTM1Q13496 603 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SEMA5AQ13591 1074 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms