RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 GALNT6Q8NCL4 622 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 GDAP1Q8TB36 358 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 BRSK1Q8TDC3 778 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 CEP41Q9BYV8 373 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 DEF6Q9H4E7 631 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 ZNF768Q9H5H4 540 aaKnown RBP11.83□□□□□ -0.52
CNOT4-211ENST00000498534 PDE7BQ9NP56 450 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 SLC40A1Q9NP59 571 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 LNPEPQ9UIQ6 1025 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 CROTQ9UKG9 612 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 POLHQ9Y253 713 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 ZNF711Q9Y462 761 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 KCNMB2Q9Y691 235 aa11.83□□□□□ -0.52
CNOT4-211ENST00000498534 PIPSLA2A3N6 862 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 MTX2O75431 263 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 PMPCBO75439 489 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 SPAG6O75602 509 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 KIAA0754O94854 1291 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 RECKO95980 971 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 GYPCP04921 128 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 FGF5P12034 268 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 F8A1P23610 371 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 CASP14P31944 242 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 ARHGAP25P42331 645 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 LEPRP48357 1165 aaKnown RBP11.82□□□□□ -0.52
CNOT4-211ENST00000498534 DRG2P55039 364 aaKnown RBP11.82□□□□□ -0.52
CNOT4-211ENST00000498534 SH3BP2P78314 561 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 TMEM115Q12893 351 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-211ENST00000498534 SLC14A2Q15849 920 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.82□□□□□ -0.52
CNOT4-211ENST00000498534 TEX44Q53QW1 395 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 ATP1A1-AS1Q5TC04 95 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 ZDHHC20Q5W0Z9 365 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 SLC9A4Q6AI14 798 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 IRGCQ6NXR0 463 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 FAM92BQ6ZTR7 304 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 BZW1Q7L1Q6 419 aaKnown RBP11.82□□□□□ -0.52
CNOT4-211ENST00000498534 PPP1R3BQ86XI6 285 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 VSIG1Q86XK7 387 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 TRAPPC5Q8IUR0 188 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 SLC35G2Q8TBE7 412 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 KLHL6Q8WZ60 621 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 VPS35Q96QK1 796 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 RAB33BQ9H082 229 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 GLOD4Q9HC38 313 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 ZNHIT6Q9NWK9 470 aaKnown RBP11.82□□□□□ -0.52
CNOT4-211ENST00000498534 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.82□□□□□ -0.52
CNOT4-211ENST00000498534 IFNKQ9P0W0 207 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 ANKMY1Q9P2S6 941 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 TRIM10Q9UDY6 481 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 EPHA6Q9UF33 1036 aa11.82□□□□□ -0.52
CNOT4-211ENST00000498534 MRPS18BQ9Y676 258 aaKnown RBP11.82□□□□□ -0.52
CNOT4-211ENST00000498534 A0A0A6YYK5 440 aaPredicted RBP11.81□□□□□ -0.52
CNOT4-211ENST00000498534 OR52A4PA6NMU1 304 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 KIF1CO43896 1103 aaKnown RBP11.81□□□□□ -0.52
CNOT4-211ENST00000498534 AKR1B10O60218 316 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 NTRK1P04629 796 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 TMEM253P0C7T8 217 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 BRAFP15056 766 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 NELFEP18615 380 aaKnown RBP11.81□□□□□ -0.52
CNOT4-211ENST00000498534 HNRNPH3P31942 346 aaKnown RBP11.81□□□□□ -0.52
CNOT4-211ENST00000498534 HMGCLP35914 325 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 CAPZBP47756 277 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 NR2C2P49116 596 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 ARL4DP49703 201 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 GPR18Q14330 331 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 ATP13A5Q4VNC0 1218 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 TCTN3Q6NUS6 607 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 PRSS42Q7Z5A4 293 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 AMZ2Q86W34 360 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 BPHLQ86WA6 291 aaPredicted RBP11.81□□□□□ -0.52
CNOT4-211ENST00000498534 ATCAYQ86WG3 371 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 RFX6Q8HWS3 928 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 ZNF547Q8IVP9 402 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 OR8K1Q8NGG5 319 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 SPATA22Q8NHS9 363 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 SEC14L1Q92503 715 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 UBXN4Q92575 508 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 TADA1Q96BN2 335 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 FCRL4Q96PJ5 515 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 PACSIN1Q9BY11 444 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 ZCCHC2Q9C0B9 1178 aaKnown RBP11.81□□□□□ -0.52
CNOT4-211ENST00000498534 TWSG1Q9GZX9 223 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 TRABDQ9H4I3 376 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 BPIFA1Q9NP55 256 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 NENFQ9UMX5 172 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 TP53TG5Q9Y2B4 290 aa11.81□□□□□ -0.52
CNOT4-211ENST00000498534 RP1L1Q8IWN7 2480 aaPredicted RBP11.8□□□□□ -0.52
CNOT4-211ENST00000498534 SYCE3A1L190 88 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 CDC14CA4D256 554 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 CREG1O75629 220 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 RFPL1O75677 317 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 POP7O75817 140 aaKnown RBP11.8□□□□□ -0.52
CNOT4-211ENST00000498534 MT-CYBP00156 380 aaPredicted RBP11.8□□□□□ -0.52
CNOT4-211ENST00000498534 EPOP01588 193 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 DYNLT1P63172 113 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 PDE1BQ01064 536 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 DNASE1L3Q13609 305 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 LRRC38Q5VT99 294 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms